AndrewYKohMD

PubMed

• 1 citations
  Susceptible bacteria can survive antibiotic treatment in the mammalian gastrointestinal tract without evolving resistance.
  Marinelle Rodrigues, Parastoo Sabaeifard, Muhammed Sadik Yildiz, Adam Lyon, Laura Coughlin, Sara Ahmed, Nicole Poulides, Ahmet C Toprak, Cassie Behrendt, Xiaoyu Wang, ...> ;Cell Host & Microbe. 2024 Mar 13
• 4 citations
  Precision modulation of dysbiotic adult microbiomes with a human-milk-derived synbiotic reshapes gut microbial composition and metabolites.
  Julie E Button, Casey M Cosetta, Abigail L Reens, Sarah L Brooker, Aislinn D Rowan-Nash, Richard C Lavin, Russell Saur, Shuning Zheng, Chloe A Autran, Martin L Lee, Ad...> ;Cell Host & Microbe. 2023 Sep 13
• 13 citations
  Immune checkpoint blockade induces gut microbiota translocation that augments extraintestinal antitumor immunity.
  Yongbin Choi, Jake N Lichterman, Laura A Coughlin, Nicole Poulides, Wenling Li, Priscilla Del Valle, Suzette N Palmer, Shuheng Gan, Jiwoong Kim, Xiaowei Zhan, Yajing G...> ;Science Immunology. 2023 Mar 10
• IsoAnalytics: a single-cell proteomics web server.
  Suzette N Palmer, Andrew Y Koh, Xiaowei Zhan> ;Bioinformatics Advances. 2023 Jan 1
• 2 citations
  Tachygastria in Preterm Infants: A Longitudinal Cohort Study.
  Eric Brum Ortigoza, Jackson Cagle, Larry Steven Brown, Sherief Mansi, Sandra Peralez Gosser, Ashley D Montgomery, Zeri Foresman, Monica L Boren, Pamela S Pettit, Tami ...> ;Journal of Pediatric Gastroenterology and Nutrition. 2022 Nov 1
• 3 citations
  MB-SupCon: Microbiome-based Predictive Models via Supervised Contrastive Learning.
  Sen Yang, Shidan Wang, Yiqing Wang, Ruichen Rong, Jiwoong Kim, Bo Li, Andrew Y Koh, Guanghua Xiao, Qiwei Li, Dajiang J Liu, Xiaowei Zhan> ;Journal of Molecular Biology. 2022 Aug 15
• 24 citations
  Dosing a synbiotic of human milk oligosaccharides and B. infantis leads to reversible engraftment in healthy adult microbiomes without antibiotics.
  Julie E Button, Chloe A Autran, Abigail L Reens, Casey M Cosetta, Steven Smriga, Megan Ericson, Jessica V Pierce, David N Cook, Martin L Lee, Adam K Sun, Amin M Alousi...> ;Cell Host & Microbe. 2022 May 11
• 15 citations
  Volumetric Modulated Arc Therapy Enabled Total Body Irradiation (VMAT-TBI): Six-year Clinical Experience and Treatment Outcomes
  E.R. Zhang-Velten, David Parsons, Pam Lee, Eric Chambers, Ramzi Abdulrahman, Neil Desai, Tu Dan, Zabi Wardak, Robert Timmerman, Madhuri Vusirikala, Prapti A. Patel, Ti...> ;Transplantation and Cellular Therapy. 2021 Nov 11
• 21 citations
  Candida albicans Isolates 529L and CHN1 Exhibit Stable Colonization of the Murine Gastrointestinal Tract.
  Liam D McDonough, Animesh Mishra, Nicholas L. Tosini, Pallavi Kakade, Swathi Penumutchu, Shen-Huan Liang, Corrine Maufrais, Bing Zhai, Ying Taur, Peter Belenky, Richar...> ;Mbio. 2021 Nov 2
• 10 citations
  The Antibiotic Efflux Protein TolC Is a Highly Evolvable Target under Colicin E1 or TLS Phage Selection.
  Yusuf Talha Tamer, Ilona K. Gaszek, Marinelle Rodrigues, Fatma S. Coskun, Michael Farid, Andrew Y. Koh, William P. Russ, Erdal Toprak> ;Molecular Biology and Evolution. 2021 Sep 27
• 7 citations
  The microbial and host factors that govern Candida gastrointestinal colonization and dissemination.
  Animesh Mishra, Andrew Y. Koh> ;Current Opinion in Microbiology. 2021 Jun 7
• 29 citations
  A trimethoprim derivative impedes antibiotic resistance evolution.
  Madhu Sudan Manna, Yusuf Talha Tamer, Ilona K. Gaszek, Nicole Poulides, Ayesha Ahmed, Xiaoyu Wang, Furkan C.R. Toprak, Da Nae R. Woodard, Andrew Y. Koh, Noelle S. Will...> ;Nature Communications. 2021 May 19
• MetaPrism: A versatile toolkit for joint taxa/gene analysis of metagenomic sequencing data
  Jiwoong Kim, Shuang Jiang, Yiqing Wang, Guanghua Xiao, Yang Xie, Dajiang J. Liu, Qiwei Li, Andrew Y. Koh, Xiaowei Zhan> ;G3. 2021 Apr 15
• 4 citations
  Unbiased Microbiome and Metabolomic Profiling of Fecal Samples from Patients with Melanoma
  Ashley Bui, Yongbin Choi, Arthur E Frankel, Andrew Y. Koh> ;Methods in Molecular Biology. 2021 Jan 1
• 21 citations
  Transient neonatal antibiotic exposure increases susceptibility to late-onset sepsis driven by microbiota-dependent suppression of type 3 innate lymphoid cells.
  Xinying Niu, Sarah I. F. Daniel, Dharmendra Kumar, Elizabeth Y. Ding, Rashmin C. Savani, Andrew Y. Koh, Julie Mirpuri> ;Scientific Reports. 2020 Jul 31
• 13 citations
  The Impact of Lactobacillus Probiotics on the Gut Microbiota in Children With Short Bowel Syndrome.
  Hannah G. Piper, Laura A. Coughlin, Sarah K. Hussain, Van Nguyen, Nandini Channabasappa, Andrew Y. Koh> ;The Journal of Surgical Research. 2020 Jul 1
• 8 citations
  HARMONIES: A Hybrid Approach for Microbiome Networks Inference via Exploiting Sparsity.
  Shuang Jiang, Guanghua Xiao, Andrew Y. Koh, Yingfei Chen, Bo Yao, Qiwei Li, Xiaowei Zhan> ;Frontiers in Genetics. 2020 Jun 3
• 36 citations
  The gut microbiome and thromboembolism.
  Rida Abid Hasan, Andrew Y. Koh, Ayesha Zia> ;Thrombosis Research. 2020 Mar 6
• 11 citations
  Transcriptional profiling identifies caspase-1 as a T cell-intrinsic regulator of Th17 differentiation.
  Yajing Gao, Krystin Deason, Aakanksha Jain, Ricardo A. Irizarry-Caro, Igor Dozmorov, Laura A. Coughlin, Isabella Rauch, Bret M. Evers, Andrew Y. Koh, Edward K. Wakelan...> ;The Journal of Experimental Medicine. 2020 Apr 6
• 62 citations
  Reduced anti-inflammatory gut microbiota are associated with depression and anhedonia.
  Brittany L. Mason, Qiwei Li, Abu Minhajuddin, Andrew H. Czysz, Laura A. Coughlin, Sarah K. Hussain, Andrew Y. Koh, Madhukar H. Trivedi> ;Journal of Affective Disorders. 2020 Apr 1
• 129 citations
  The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View
  Joao B. Xavier, Vincent B. Young, Joseph D. Skufca, Fiona Ginty, Traci L. Testerman, Alexander T. Pearson, Paul Macklin, Amir Mitchell, Ilya Shmulevich, Lei Xie, J. Gr...> ;Trends in Cancer. 2020 Mar 1
• 5 citations
  A comparison of small bowel and fecal microbiota in children with short bowel syndrome
  Hannah G. Piper, Laura A. Coughlin, Van Nguyen, Nandini Channabasappa, Andrew Y. Koh> ;Journal of Pediatric Surgery. 2020 Feb 1
• 32 citations
  VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning.
  Jiwoong Kim, David E. Greenberg, Reed Pfifer, Shuang Jiang, Guanghua Xiao, Samuel A. Shelburne, Andrew Y. Koh, Yang Xie, Xiaowei Zhan> ;Plos Computational Biology. 2020 Jan 13
• 20 citations
  The gut microbiota in transplant patients.
  Pearlie P. Chong, Andrew Y. Koh> ;Blood Reviews. 2020 Jan 1
• 8 citations
  A Bayesian zero-inflated negative binomial regression model for the integrative analysis of microbiome data.
  Shuang Jiang, Guanghua Xiao, Andrew Y. Koh, Jiwoong Kim, Qiwei Li, Xiaowei Zhan> ;Biostatistics. 2021 Jul 17
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Abstracts/Posters

• Real World Outcomes of Letermovir Prophylaxis in Unselected High Risk CMV Seropositive Hematopoietic Stem Cell Transplant Recipients
  Andrew Y. Koh, 61st Annual American Society of Hematology Meeting, Orlando, FL, 12/8/2019

Lectures

• ASPHO 2013 Review Course 
  American Society of Pediatric Hematology/Oncology( ASPHO), Dallas, Texas - 2/7/2013