JamesA.FosterMD

PubMed

• What's Normal? Microbiomes in Human Milk and Infant Feces Are Related to Each Other but Vary Geographically: The INSPIRE Study.
  Lackey, K. A.,Williams, J. E.,Meehan, C. L.,Zachek, J. A.,Benda, E. D.,Price, W. J.,Foster, J. A.,Sellen, D. W.,Kamau-Mbuthia, E. W.,Kamundia, E. W.,Mbugua, S.,Moore, ...> ;Front Nutr. 2019 May 07
• HIV Vaccine Mystery and Viral Shell Disorder.
  Goh, G. K.,Dunker, A. K.,Foster, J. A.,Uversky, V. N.> ;Biomolecules. 2019 May 11
• Household composition and the infant fecal microbiome: The INSPIRE study.
  Lane, A. A.,McGuire, M. K.,McGuire, M. A.,Williams, J. E.,Lackey, K. A.,Hagen, E. H.,Kaul, A.,Gindola, D.,Gebeyehu, D.,Flores, K. E.,Foster, J. A.,Sellen, D. W.,Kamau-...> ;Am. J. Phys. Anthropol.. 2019 Apr 24
• Defining and simulating open-ended novelty: requirements, guidelines, and challenges.
  Banzhaf W, Baumgaertner B, Beslon G, Doursat R, Foster JA, McMullin B, de Melo VV, Miconi T, Spector L, Stepney S, White R> ;Theory Biosci.. 2016-09-01
• MetAmp: combining amplicon data from multiple markers for OTU analysis.
  Zhbannikov IY, Foster JA> ;Bioinformatics. 2015-06-01
• Seed: a user-friendly tool for exploring and visualizing microbial community data.
  Beck, D.,Dennis, C.,Foster, J. A.> ;Bioinformatics. 2014 Oct 22
• mcaGUI: microbial community analysis R-Graphical User Interface (GUI).
  Copeland WK, Krishnan V, Beck D, Settles M, Foster JA, Cho K, Day M, Hickey R, Schütte UME, Zhou X, Williams CJ, Forney LJ, Abdo Z> ;Bioinformatics. 2012-08-15
• Estimating population diversity with CatchAll.
  Bunge, J., Woodard, L., Böhning, D., Foster, J. A., Connolly, S., Allen, H. K.> ;Bioinformatics. 2012 Apr 1
• Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life.
  Foster, J.A., Bunge, J., Gilbert, J.A., Moore, J.H., Golla, S.> ;Brief Bioinform. 2012 Jul
• Transitional states of acrosomal exocytosis and proteolytic processing of the acrosomal matrix in guinea pig sperm.
  Kim, K., Foster, J.A., Kvasnicka, K.W., Gerton, G.L.> ;Mol Reprod Dev. 2011 Dec
• Microbial Communities as Experimental Units.
  Day, M.D., Beck, D., Foster, J.A.> ;Bioscience. 2011 May
• OTUbase: an R infrastructure package for operational taxonomic unit data.
  Beck, D.,Settles, M.,Foster, J. A.> ;Bioinformatics. 2011 Jun 15
• Computing with bacterial constituents, cells and populations: from bioputing to bactoputing.
  Norris, V.,Zemirline, A.,Amar, P.,Audinot, J. N.,Ballet, P.,Ben-Jacob, E.,Bernot, G.,Beslon, G.,Cabin, A.,Fanchon, E.,Giavitto, J. L.,Glade, N.,Greussay, P.,Grondin, Y...> ;Theory Biosci. 2011 Sep
• Characterization of the diversity and temporal stability of bacterial communities in human milk.
  Hunt, K. M., Foster, J. A., Forney, L. J., Schütte, U. M., Beck, D. L., Abdo, Z., Fox, L. K., Williams, J. E., McGuire, M. K., McGuire, M. A.> ;PLoS One. 2011
• Mice lacking FABP9/PERF15 develop sperm head abnormalities but are fertile.
  Selvaraj, V., Asano, A., Page, J.L., Nelson, J.L., Kothapalli, K.D., Foster, J.A., Brenna, J.T., Weiss, R.S., Travis, A.J.> ;Dev Biol. 2010 Dec 15
• Effects of repeated light-dark phase shifts on voluntary ethanol and water intake in male and female Fischer and Lewis rats.
  Rosenwasser, A.M., Clark, J.W., Fixaris, M.C., Belanger, G.V., Foster, J.A.> ;Alcohol. 2010 May
• MiCA: a web-based tool for the analysis of microbial communities based on terminal-restriction fragment length polymorphisms of 16S and 18S rRNA genes.
  Shyu, C., Soule, T., Bent, S.J., Foster, J.A., Forney, L.J.> ;Microb Ecol. 2007 May
• Clearcut: a fast implementation of relaxed neighbor joining.
  Sheneman L, Evans J, Foster JA> ;Bioinformatics. 2006-11-15
• The vaginal flora of healthy women is not always dominated by Lactobacillus species.
  Forney, L.J., Foster, J.A., Ledger, W.> ;J Infect Dis. 2006 Nov 15
• The monomeric GTP binding protein, rab3a, is associated with the acrosome in mouse sperm.
  Ward CR, Faundes D, Foster JA> ;Mol. Reprod. Dev.. 1999-08-01
• Assembly of AKAP82, a protein kinase A anchor protein, into the fibrous sheath of mouse sperm.
  Johnson LR, Foster JA, Haig-Ladewig L, VanScoy H, Rubin CS, Moss SB, Gerton GL> ;Dev. Biol.. 1997-12-15
• Autoantigen 1 of the guinea pig sperm acrosome is the homologue of mouse Tpx-1 and human TPX1 and is a member of the cysteine-rich secretory protein (CRISP) family.
  Foster JA, Gerton GL> ;Mol. Reprod. Dev.. 1996-06-01
• Application of ecological network theory to the human microbiome.
  Foster, J. A.,Krone, S. M.,Forney, L. J.> ;Interdiscip Perspect Infect Dis. 2008 Jan 01
• Network analysis suggests a potentially 'evil' alliance of opportunistic pathogens inhibited by a cooperative network in human milk bacterial communities.
  Sam Ma, Z.,Guan, Q.,Ye, C.,Zhang, C.,Foster, J. A.,Forney, L. J.> ;Sci Rep. 2015 Feb 06
• GA-Based Selection of Vaginal Microbiome Features Associated with Bacterial Vaginosis.
  Carter, J.,Beck, D.,Williams, H.,Foster, J.,Dozier, G.> ;Genet Evol Comput Conf. 2014 Dec 30
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