YeYuanMDPhD

PubMed

• 9 citations
  Automated Tumor Segmentation in Radiotherapy.
  Ricky R Savjani, Michael Lauria, Supratik Bose, Jie Deng, Ye Yuan, Vincent Andrearczyk> ;Seminars in Radiation Oncology. 2022 Oct 1
• Pulmonary Toxic Effects After Myeloablative Conditioning With Total Body Irradiation Delivered via Volumetric Modulated Arc Therapy With Fludarabine.
  Aram S Modrek, Jerome M Karp, David Byun, Naamit K Gerber, Maher Abdul-Hay, Ahmad Samer Al-Homsi, Paulina Galavis, Jose Teruel, Ye Yuan> ;Practical Radiation Oncology. 2022 May 19
• 22 citations
  Stereotactic Body Radiotherapy for High-Risk Localized Carcinoma of the Prostate (SHARP) Consortium: Analysis of 344 Prospectively Treated Patients.
  Ritchell van Dams, Naomi Y. Jiang, Donald B. Fuller, Andrew Loblaw, Tommy Jiang, Alan J. Katz, Sean P. Collins, Nima Aghdam, Simeng Suy, Kevin L. Stephans, Ye Yuan, Ni...> ;International Journal of Radiation Oncology, Biology, Physics. 2021 Jan 23
• 8 citations
  Development of Fe3O4 core–TiO2 shell nanocomposites and nanoconjugates as a foundation for neuroblastoma radiosensitization
  William Liu, Salida Mirzoeva, Ye Yuan, Junjing Deng, Si Chen, Barry Lai, Stefan Vogt, Karna Shah, Rahul Shroff, Reiner Bleher, Qiaoling Jin, Nghia Vo, Remon Bazak, Car...> ;Cancer Nanotechnology. 2021 Jan 1
• 20 citations
  Dose-response with stereotactic body radiotherapy for prostate cancer: A multi-institutional analysis of prostate-specific antigen kinetics and biochemical control.
  Rebecca Levin-Epstein, Naomi Y. Jiang, Xiaoyan Wang, Shrinivasa K. Upadhyaya, Sean P. Collins, Simeng Suy, Nima Aghdam, Constantine Mantz, Alan J. Katz, Leszek Miszczy...> ;Radiotherapy and Oncology. 2021 Jan 1
• 15 citations
  Prostate-specific antigen kinetics and biochemical control following stereotactic body radiation therapy, high dose rate brachytherapy, and low dose rate brachytherapy...
  Rebecca Levin-Epstein, Ryan Cook, J. Karen Wong, Richard G. Stock, D. Jeffrey Demanes, Sean P. Collins, Nima Aghdam, Simeng Suy, Constantine Mantz, Alan J. Katz, Nicho...> ;Radiotherapy and Oncology. 2020 Oct 1
• 2 citations
  Immunotherapy and Radiation Therapy for Non-Small Cell Lung Cancer-A Stimulating Partnership.
  Ritchell van Dams, Ye Yuan, Clifford G. Robinson, Percy Lee> ;Seminars in Respiratory and Critical Care Medicine. 2020 Jun 1
• 8 citations
  Memory of Divisional History Directs the Continuous Process of Primitive Hematopoietic Lineage Commitment
  Jeffrey M. Bernitz, Katrina Rapp, Michael G. Daniel, Dmitrii Shcherbinin, Ye Yuan, Andreia Gomes, Avinash Waghray, Ran Brosh, Alexander Lachmann, Avi Ma'ayan, Dmitri P...> ;Stem Cell Reports. 2020 Apr 14
• 12 citations
  Treatment of the primary tumor in metastatic prostate cancer.
  Ye Yuan, Amar U. Kishan, Nicholas G. Nickols> ;World Journal of Urology. 2019 Dec 1
• 201 citations
  Long-term Outcomes of Stereotactic Body Radiotherapy for Low-Risk and Intermediate-Risk Prostate Cancer.
  Amar U. Kishan, Audrey Dang, Alan J. Katz, Constantine Mantz, Sean P. Collins, Nima Aghdam, Fang-I Chu, Irving D. Kaplan, Limor Appelbaum, Donald B. Fuller, Robert M. ...> ;JAMA Network Open. 2019 Feb 1
• 25 citations
  Functional microRNA binding site variants.
  Ye Yuan, Joanne B. Weidhaas> ;Molecular Oncology. 2019 Jan 1
• 33 citations
  Oncogenic role of SFRP2 in p53-mutant osteosarcoma development via autocrine and paracrine mechanism.
  Huen Suk Kim, Seungyeul Yoo, Ruoji Zhou, An Xu, Jeffrey M. Bernitz, Ye Yuan, Andreia Gomes, Michael G. Daniel, Jie Su, Elizabeth G. Demicco, Jun Zhu, Kateri A. Moore, ...> ;Proceedings of the National Academy of Sciences of the United States of America. 2018 Nov 20
• 17 citations
  Multi-Institutional Analysis of Prostate-Specific Antigen Kinetics After Stereotactic Body Radiation Therapy.
  Naomi Y. Jiang, Audrey Dang, Ye Yuan, Fang-I Chu, David Shabsovich, Christopher R. King, Sean P. Collins, Nima Aghdam, Simeng Suy, Constantine Mantz, Leszek Miszczyk, ...> ;International Journal of Radiation Oncology, Biology, Physics. 2018 Nov 1
• 150 citations
  Transitional basal cells at the squamous–columnar junction generate Barrett’s oesophagus
  Ming Jiang, Haiyan Li, Yongchun Zhang, Ying Yang, Rong Lu, Kuancan Liu, Sijie Lin, Xiaopeng Lan, Haikun Wang, Han Wu, Jian Zhu, Zhongren Zhou, Jianming Xu, Dong Kee Le...> ;Nature. 2017 Oct 26
• 7 citations
  Testosterone Levels and Sexual Quality of Life After Stereotactic Body Radiation Therapy for Prostate Cancer: A Multi-Institutional Analysis of Prospective Trials.
  Ye Yuan, Nima Aghdam, Christopher R. King, Donald B. Fuller, Julius Weng, Fang-I Chu, George Mardirossian, Ankur D. Patel, Nicholas G. Nickols, Patrick A. Kupelian, Mi...> ;International Journal of Radiation Oncology, Biology, Physics. 2017 Oct 1
• 11 citations
  Gaps in Radiation Therapy Awareness: Results From an Educational Multi-institutional Survey of US Internal Medicine Residents.
  Narek Shaverdian, Sun Mi Yoo, Eric M. Chang, Naomi Jiang, Ye Yuan, Kiri A. Sandler, Michael L. Steinberg, Percy Lee> ;International Journal of Radiation Oncology, Biology, Physics. 2017 Aug 1
• 3 citations
  Low-Dose-Rate Brachytherapy Boosting Concurrent Chemoradiation as a Definitive Treatment Modality for Cervical Cancer: Long-term Clinical Results of Outcomes and Assoc...
  Tamer Refaat, Eric D. Donnelly, Michelle S. Gentile, Caroline J. Novak, Ye Yuan, Gehan A Khedr, I. Helenowksi, John R. Lurain, Julian Schink, Alfred Rademaker, V. Sath...> ;American Journal of Clinical Oncology. 2016 Apr 1
• 71 citations
  Tex10 Coordinates Epigenetic Control of Super-Enhancer Activity in Pluripotency and Reprogramming
  Junjun Ding, Xin Huang, Ning-Yi Shao, Hongwei Zhou, Dung Fang Lee, Francesco Faiola, Miguel Fidalgo, Diana Guallar, Arven Saunders, Pavel V. Shliaha, Hailong Wang, Avi...> ;Cell Stem Cell. 2015 Jun 4
• 8 citations
  The Bionanoprobe: Synchrotron-based Hard X-ray Fluorescence Microscopy for 2D/3D Trace Element Mapping.
  Si Chen, Tatjana Paunesku, Ye Yuan, Qiaoling Jin, Benjamin Hornberger, Claus Flachenecker, Barry Lai, Keith Brister, Chris Jacobsen, Gayle E. Woloschak, Stefan Vogt> ;Microscopy Today. 2015 Apr 29
• 155 citations
  Modeling Familial Cancer with Induced Pluripotent Stem Cells
  Dung Fang Lee, Jie Su, Huen Suk Kim, Betty Chang, Dmitri Papatsenko, Ruiying Zhao, Ye Yuan, Julian A. Gingold, Weiya Xia, Henia Darr, Razmik Mirzayans, Mien Chie Hung,...> ;Cell. 2015 Apr 9
• 56 citations
  Epidermal Growth Factor Receptor Targeted Nuclear Delivery and High-Resolution Whole Cell X-ray Imaging of Fe3O4@TiO2 Nanoparticles in Cancer Cells
  Ye Yuan, Si Chen, Tatjana Paunesku, Sophie Charlotte Gleber, William Liu, Caroline Doty, Rachel Mak, Junjing Deng, Qiaoling Jin, Barry Lai, Keith Brister, Claus Flache...> ;ACS Nano. 2013 Nov 27
• 68 citations
  Nanocarriers Enhance Doxorubicin Uptake in Drug-Resistant Ovarian Cancer Cells
  Hans Arora, Mark P. Jensen, Ye Yuan, Aiguo Wu, Stefan Vogt, Tatjana Paunesku, Gayle E. Woloschak> ;Cancer Research. 2012 Feb 1
• 3 citations
  Interrogation of EGFR‐Targeted Uptake of TiO2 Nanoconjugates by X‐ray Fluorescence Microscopy
  Ye Yuan, Tatjana Paunesku, Hans Arora, Jesse Ward, Stefan Vogt, Gayle E. Woloschak> ;AIP Conference Proceedings. 2011 Sep 1
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Journal Articles

• Correction: eEF-2 Kinase Is a Critical Regulator of Warbrug Effect Through Controlling PP2A-A Synthesis  
  L Zhang, D Liu, J W Yang, Y Li, J Liao, G Wan, Y Yuan, B Han, Nature
• The Bionanoprobe: Hard X-Ray Fluorescence Nanoprobe With Cryogenic Capabilities  
  Chen S, Deng J, Yuan Y, Flachenecker C, Mak R, Hornberger B, Jin Q, Shu D, Lai B, Maser J, Roehrig C, Paunesku T, Gleber S, Vine D, Finney L, VonOsinski J, Bolbat M, S..., Journal of Synchotron Radiation, 1/1/2014
• Gaps in Radiation Therapy Awareness: Results From an Educational Multi-institutional Survey of US Internal Medicine Residents  
  Shaverdian N, Yoo SM, Cook R, Chang EM, Jiang N, Yuan Y, Sandler K, Steinberg M, Lee P, Int J Radiat Oncol Biol Phys, 1/1/2017
• Low-Dose-Rate Brachytherapy Boosting Concurrent Chemoradiation As A Definitive Treatment Modality For Cervical Cancer: Long-Term Clinical Results Of Outcomes And Assoc...  
  Refaat T, Donnelly ED, Gentile M, Novak C, Yuan Y, Khedr GA, Helenowski I, Lurain J, Schink J, Rademaker A, Sathiaseelan V, Strauss JB, Small W, American Journal of Clinical Oncology, 1/30/2014
• Epidermal Growth Factor Receptor Targeted Nuclear Delivery And High Resolution Whole Cell X-Ray Imaging Of Fe3O4@TiO2 Nanoparticles In Cancer Cells  
  Yuan Y, Chen S, Paunesku T, Gleber SC, Liu WC, Doty CB, Mak R, Deng J, Jin Q, Lai B, Brister K, Flachenecker C, Jacobsen C, Vogt S, Woloschak GE, ACS Nano, 1/1/2013
• Mapping The Subcellular Localization Of Fe3O4@TiO2 Nanoparticles By X-Ray Fluorescence Microscopy  
  Yuan Y, Chen S, Gleber SC, Lai B, Brister K, Flachenecker C, Wanzer B, Paunesku T, Vogt S, Woloschak GE, Journal of Physics: Conference Series, 1/1/2013
• Nanocarriers Enhance Doxorubicin Uptake In Drug-Resistant Ovarian Cancer Cells  
  Arora HC, Jensen MP, Yuan Y, Wu A, Vogt S, Paunesku T, Woloschak GE, Cancer Research, 1/1/2012
• Interrogation Of EGFR Targeted Uptake Of TiO2 Nanoconjugates By X-Ray Fluorescence Microscopy  
  Yuan Y, Paunesku T, Arora HC, Ward J, Vogt S, Woloschak GE, AIP Conference Proceedings, 1/1/2011
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Books/Book Chapters

• Nanomaterials for the Life Sciences Volume 8. 
  Chapter: Titanium Dioxide Nanocomposites. 
  Arora HC, Doty CB, Yuan Y, Boyle J, Petras K, Rabatic B, Paunesku T, Woloschak GEEditors: Challa S.S.R. Kumar.John Wiley & Sons, Inc.2010

Abstracts/Posters

• Development of a Genomic Signature for Locoregional Failure after Radiation in the TCGA Head and Neck Cohort
  Ye Yuan, Xiaoying Pan, Xianrong Qi, Robert K. Chin, International Journal of Radiation Oncology Biology Physics, 11/1/2018
• MicroRNA-138 Regulation of PD-L1 Expression Immediately after Radiation is Altered by the rs4742098 Variant
  Ye Yuan, Mara Heilig, Songyi Jung, Emily Rietdorf, Joanne B. Weidhaas, International Journal of Radiation Oncology Biology Physics, 11/1/2018
• Testosterone Levels and Sexual Quality of Life Following Stereotactic Body Radiotherapy for Prostate Cancer: A Multi-Institutional Analysis of Prospective Trials.
  Yuan Y, Fuller DB, Mardirossian G, King CR, Kishan AU, American Society for Radiation Oncology 59th Annual Meeting, San Diego, CA, 1/24/2017
• EGFR-mediated Nuclear Delivery Improves the Genotoxic Effect of Fe3O4@TiO2 Nanoparticles
  Yuan Y, Paunesku T, Liu WC, Chen S, Mak R, Deng J, Jin Q, Lai B, Brister K, Flachenecker C, Jacobsen C, Vogt S, Woloschak GE, INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 9/2013
• EGFR-mediated Nuclear Delivery Improves the Genotoxic Effect of Fe3O4@TiO2 Nanoparticles.
  Yuan Y, Paunesku T, Liu WC, Chen S, Mak R, Deng J, Jin Q, Lai B, Brister K, Flachenecker C, Jacobsen C, Vogt S, Woloschak GE, American Society for Radiation Oncology 55th Annual Meeting, Atlanta, GA, 1/22/2013
• EGFR-mediated Nuclear Delivery of Fe3O4@TiO2 Nanoparticles.
  Yuan Y, Chen S, Paunesku T, Liu WC, Lai B, Vogt S, Woloschak GE, Keystone Symposia, Stockholm, Sweden, 1/17/2013
• Receptor Mediated Delivery of Therapeutic Fe3O4 Core TiO2 Shell Nanoparticles.
  Yuan Y, Liu WC, Wu A, Paunesku T, Woloschak GE, American Association of Cancer Research Conference, Chicago, IL, 1/31/2012
• Uptake Mechanisms of Radiosensitizing Tumor Targeted TiO2 Nanoparticles.
  Yuan Y, Paunesku T, Arora HC, Ward J, Raha S, Vogt S, Woloschak GE, Radiation Research Society Conference, Maui, HI, 1/25/2010
• Uptake Mechanisms of EGFR-targeted Nanoparticles.
  Yuan Y, Paunesku T, Arora HC, Ward J, Raha S, Vogt S, Woloschak GE, Northwestern Medical Scientist Training Program Annual Retreat; X-ray Microscopy Conference, Chicago, IL, 1/20/2010
• Uptake Mechanisms of EGFR-targeted TiO2 Nanoparticles.
  Yuan Y, Paunesku T, Ward J, Vogt S, Woloschak GE, American Society of Clinical Oncology Conference, Chicago, IL, 1/4/2010
• Characterization of Novel Endothelial Cell Specific Proteins and their Application to Anti-angiogenic Therapy.
  Yuan Y, Achauer Honors Symposium, Stanford, CA, 1/1/2006
• The Therapeutic Potential of Epidermal Growth Factor Like 7 (EGFL7).
  Yuan Y, Symposium of Undergraduate Research in Progress, Stanford, CA, 1/1/2005
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Lectures

• Testosterone Levels and Sexual Quality of Life Following Stereotactic Body Radiotherapy for Prostate Cancer: A Multi-Institutional Analysis of Prospective Trials. 
  San Diego, CA - 1/24/2017
• Epidermal Growth Factor Receptor Mediated Cellular and Subcellular Delivery of Fe3O4 core-TiO2 Shell Nanoparticles 
  Lake Geneva, WI - 1/21/2013
• Targeting Nanoparticles Using Cellular Receptor EGFR 
  Chicago, IL - 1/10/2013
• Use of the BioNanoprobe to Investigate Receptor Mediated Uptake of Nanocomposites 
  Argonne National Laboratories, Lemont IL - 1/30/2012
• Targeted Cellular and Subcellular Delivery of Fe3O4@TiO2 Core-shell Nanoparticles 
  Chicago, IL - 1/28/2012
• XFM Investigations of EGFR Binding TiO2 Nanoconjugate Uptake and Localization. 
  Chicago, IL - 1/13/2010
• Transmissible Spongiform Encephalopathies 
  Chicago, IL - 1/8/2010
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Other

• Thesis: Epidermal Growth Factor Receptor Mediated Cellular and Subcellular Targeted Delivery of Fe3O4 Core-TiO2 Shell Nanoparticles 
  Yuan Y
  Northwestern University, Chicago, IL - 1/1/2013
• Honors Thesis: Characterization of Novel Endothelial Cell Specific Proteins and Their Application to Anti-Angiogenic Therapy 
  Yuan Y
  Stanford University, Stanford, CA - 1/1/2006