DavidABakerMDMS, FACOG

PubMed

• 1 citations
  Vestibulodynia and the Vaginal Microbiome: A Case-Control Study.
  Doreen A Panzarella, Tatyana Peresleni, Jackie L Collier, Christina Kocis, David A Baker> ;The Journal of Sexual Medicine. 2022 Sep 1
• 8 citations
  Progesterone effects on vaginal cytokines in women with a history of preterm birth.
  David Garry, David Baker, Malini D. Persad, Tatyana Peresleni, Christina Kocis, Michael Demishev> ;Plos One. 2018 Dec 31
• De novo design of self-assembling helical protein filaments.
  Shen, H.,Fallas, J. A.,Lynch, E.,Sheffler, W.,Parry, B.,Jannetty, N.,Decarreau, J.,Wagenbach, M.,Vicente, J. J.,Chen, J.,Wang, L.,Dowling, Q.,Oberdorfer, G.,Stewart, L...> ;Science. 2018 Nov 10
• Enhanced CRFR1-dependent regulation of a ventral tegmental area to prelimbic cortex projection establishes susceptibility to stress-induced cocaine seeking.
  Vranjkovic, O.,Van Newenhizen, E.,Nordness, M. E.,Blacktop, J. M.,Urbanik, L. A.,Mathy, J. C.,McReynolds, J. R.,Miller, A. M.,Doncheck, E. M.,Kloehn, T. M.,Stinnett, G...> ;J. Neurosci.. 2018 Oct 26
• Protein homology model refinement by large-scale energy optimization.
  Park, H.,Ovchinnikov, S.,Kim, D. E.,DiMaio, F.,Baker, D.> ;Proc. Natl. Acad. Sci. U.S.A.. 2018 Mar 07
• Confirmation of intersubunit connectivity and topology of designed protein complexes by native MS.
  Sahasrabuddhe, A.,Hsia, Y.,Busch, F.,Sheffler, W.,King, N. P.,Baker, D.,Wysocki, V. H.> ;Proc. Natl. Acad. Sci. U.S.A.. 2018 Jan 21
• Evolution of a designed protein assembly encapsulating its own RNA genome.
  Butterfield, G. L.,Lajoie, M. J.,Gustafson, H. H.,Sellers, D. L.,Nattermann, U.,Ellis, D.,Bale, J. B.,Ke, S.,Lenz, G. H.,Yehdego, A.,Ravichandran, R.,Pun, S. H.,King, ...> ;Nature. 2017 Dec 14
• High-throughput characterization of protein-protein interactions by reprogramming yeast mating.
  Younger, D.,Berger, S.,Baker, D.,Klavins, E.> ;Proc. Natl. Acad. Sci. U.S.A.. 2017 Nov 01
• Origins of coevolution between residues distant in protein 3D structures.
  Anishchenko, I.,Ovchinnikov, S.,Kamisetty, H.,Baker, D.> ;Proc. Natl. Acad. Sci. U.S.A.. 2017 Aug 09
• Global analysis of protein folding using massively parallel design, synthesis, and testing.
  Rocklin, G. J.,Chidyausiku, T. M.,Goreshnik, I.,Ford, A.,Houliston, S.,Lemak, A.,Carter, L.,Ravichandran, R.,Mulligan, V. K.,Chevalier, A.,Arrowsmith, C. H.,Baker, D.> ;Science. 2017 Jul 15
• Principles for Designing Proteins with Cavities Formed by Curved β Sheets
  David Baker, MD> ;Science Magazine. 2017 Jan 14
• Protein structure determination using metagenome sequence data.
  Ovchinnikov, S.,Park, H.,Varghese, N.,Huang, P. S.,Pavlopoulos, G. A.,Kim, D. E.,Kamisetty, H.,Kyrpides, N. C.,Baker, D.> ;Science. 2017 Jan 21
• Computational design of a homotrimeric metalloprotein with a trisbipyridyl core.
  Mills, J. H.,Sheffler, W.,Ener, M. E.,Almhjell, P. J.,Oberdorfer, G.,Pereira, J. H.,Parmeggiani, F.,Sankaran, B.,Zwart, P. H.,Baker, D.> ;Proc. Natl. Acad. Sci. U.S.A.. 2016 Dec 13
• Corticosterone Potentiation of Cocaine-Induced Reinstatement of Conditioned Place Preference in Mice Is Mediated by Blockade of the Organic Cation Transporter 3
  David Baker, MD> ;Nature. 2016-10-12
• Antagonism of GABA-B but not GABA-A receptors in the VTA prevents stress- and intra-VTA CRF-induced reinstatement of extinguished cocaine seeking in rats.
  Blacktop JM, Vranjkovic O, Mayer M, Van Hoof M, Baker DA, Mantsch JR> ;Neuropharmacology. 2016-03-01
• CB1 receptor antagonism blocks stress-potentiated reinstatement of cocaine seeking in rats.
  McReynolds JR, Doncheck EM, Vranjkovic O, Ganzman GS, Baker DA, Hillard CJ, Mantsch JR> ;Psychopharmacology (Berl.). 2016-01-01
• Stress-Induced Reinstatement of Drug Seeking: 20 Years of Progress.
  Mantsch JR, Baker DA, Funk D, Lê AD, Shaham Y> ;Neuropsychopharmacology. 2016-01-01
• Computational protein design enables a novel one-carbon assimilation pathway.
  Siegel, J. B.,Smith, A. L.,Poust, S.,Wargacki, A. J.,Bar-Even, A.,Louw, C.,Shen, B. W.,Eiben, C. B.,Tran, H. M.,Noor, E.,Gallaher, J. L.,Bale, J.,Yoshikuni, Y.,Gelb, M...> ;Proc. Natl. Acad. Sci. U.S.A.. 2015 Mar 17
• Massively parallel determination and modeling of endonuclease substrate specificity.
  Thyme SB, Song Y, Brunette TJ, Szeto MD, Kusak L, Bradley P, Baker D> ;Nucleic Acids Res.. 2014-12-16
• Beta-2 adrenergic receptors mediate stress-evoked reinstatement of cocaine-induced conditioned place preference and increases in CRF mRNA in the bed nucleus of the str...
  McReynolds JR, Vranjkovic O, Thao M, Baker DA, Makky K, Lim Y, Mantsch JR> ;Psychopharmacology (Berl.). 2014-10-01
• Stress-induced cocaine seeking requires a beta-2 adrenergic receptor-regulated pathway from the ventral bed nucleus of the stria terminalis that regulates CRF actions ...
  Vranjkovic O, Gasser PJ, Gerndt CH, Baker DA, Mantsch JR> ;J. Neurosci.. 2014-09-10
• Time course of cocaine-induced behavioral and neurochemical plasticity.
  Lutgen V, Kong L, Kau KS, Madayag A, Mantsch JR, Baker DA> ;Addict Biol. 2014-07-01
• Progressive engineering of a homing endonuclease genome editing reagent for the murine X-linked immunodeficiency locus.
  Wang, Y.,Khan, I. F.,Boissel, S.,Jarjour, J.,Pangallo, J.,Thyme, S.,Baker, D.,Scharenberg, A. M.,Rawlings, D. J.> ;Nucleic Acids Res.. 2014 Apr 01
• Reprogramming homing endonuclease specificity through computational design and directed evolution.
  Thyme SB, Boissel SJS, Arshiya Quadri S, Nolan T, Baker DA, Park RU, Kusak L, Ashworth J, Baker D> ;Nucleic Acids Res.. 2014-02-01
• Computational Design of a Protein-Based Enzyme Inhibitor.
  Procko, E.,Hedman, R.,Hamilton, K.,Seetharaman, J.,Fleishman, S. J.,Su, M.,Aramini, J.,Kornhaber, G.,Hunt, J. F.,Tong, L.,Montelione, G. T.,Baker, D.> ;J. Mol. Biol.. 2013 Sep 23
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