HongyuZhaoMD

PubMed

• Correlates of suicidal behaviors and genetic risk among United States veterans with schizophrenia or bipolar I disorder.
  Tim B Bigdeli, Peter B Barr, Nallakkandi Rajeevan, David P Graham, Yuli Li, Jacquelyn L Meyers, Bryan R Gorman, Roseann E Peterson, Frederick Sayward, Krishnan Radhakr...> ;Molecular Psychiatry. 2024 Mar 15
• Using clinical and genetic risk factors for risk prediction of 8 cancers in the UK Biobank.
  Jiaqi Hu, Yixuan Ye, Geyu Zhou, Hongyu Zhao> ;JNCI Cancer Spectrum. 2024 Feb 29
• Phenome- and genome-wide analyses of retinal optical coherence tomography images identify links between ocular and systemic health.
  Zekavat, S., Jorshery, S., Rauscher, F., Horn, K., Sekimitsu, S., Koyama, S., Nguyen, T., Costanzo, M., Jang, D., Burtt, N., Kühnapfel, A., Shweikh, Y., Ye, Y., Raghu,...> ;Science Translational Medicine. 2024 Jan 24
• Objective Analysis and Clinical Significance of the Spatial Tumor-Infiltrating Lymphocyte Patterns in Non-Small Cell Lung Cancer.
  Wang, Y., Peng, G., Gu, J., Gainor, J., Mino-Kenudson, M., Riess, J., Velcheti, V., Hellmann, M., Zhao, H., Schalper, K., Lopez de Rodas, M.> ;Clinical Cancer Research. 2024 Mar 1
• scNAT: a deep learning method for integrating paired single-cell RNA and T cell receptor sequencing profiles.
  Zhu, B., Wang, Y., Ku, L., van Dijk, D., Zhang, L., Hafler, D., Zhao, H.> ;Genome Biology. 2023 Dec 18
• 1 citations
  Mutation of key signaling regulators of cerebrovascular development in vein of Galen malformations.
  Shujuan Zhao, Kedous Y Mekbib, Martijn A van der Ent, Garrett Allington, Andrew Prendergast, Jocelyn E Chau, Hannah Smith, John Shohfi, Jack Ocken, Daniel Duran, Charu...> ;Nature Communications. 2023 Nov 17
• Decoding transcriptomic signatures of Cysteine String Protein alpha-mediated synapse maintenance.
  Na Wang, Biqing Zhu, Mary Alice Allnutt, Rosalie M Grijalva, Hongyu Zhao, Sreeganga S Chandra> ;Biorxiv. 2023 Oct 3
• Genomic evidence of sex chromosome aneuploidy and infection-associated genotypes in the tsetse fly Glossina fuscipes, the major vector of African trypanosomiasis in Ug...
  Norah P Saarman, Jae Hak Son, Hongyu Zhao, Luciano V Cosme, Yong Kong, Mo Li, Shiyu Wang, Brian L Weiss, Richard Echodu, Robert Opiro, Serap Aksoy, Adalgisa Caccone> ;Infection, Genetics and Evolution. 2023 Oct 1
• 2 citations
  Amphiregulin couples IL1RL1regulatory T cells and cancer-associated fibroblasts to impede antitumor immunity.
  Runzi Sun, Hongyu Zhao, David Shihong Gao, Andrew Ni, Haochen Li, Lujia Chen, Xinghua Lu, Kong Chen, Binfeng Lu> ;Science Advances. 2023 Aug 25
• Dectin-1 stimulation promotes a distinct inflammatory signature in the setting of HIV-infection and aging.
  Archit Kumar, Jiawei Wang, Allen Esterly, Chris Radcliffe, Haowen Zhou, Brent Vander Wyk, Heather G Allore, Sui Tsang, Lydia Barakat, Subhasis Mohanty, Hongyu Zhao, Al...> ;Aging. 2023 Aug 21
• 2 citations
  A statistical framework to identify cell types whose genetically regulated proportions are associated with complex diseases.
  Wei Liu, Wenxuan Deng, Ming Chen, Zihan Dong, Biqing Zhu, Zhaolong Yu, Daiwei Tang, Maor Sauler, Chen Lin, Louise V Wain, Michael H Cho, Naftali Kaminski, Hongyu Zhao,...> ;Plos Genetics. 2023 Jul 1
• An epigenetic clock for gestational age based on human umbilical vein endothelial cells from a diverse population of newborns.
  Gang Peng, David W Sosnowski, Susan K Murphy, Sara B Johnson, David Skaar, William S Schleif, Raquel G Hernandez, Hector Monforte, Hongyu Zhao, Cathrine Hoyo> ;Research Square. 2023 Jun 30
• Insights into human health from phenome- and genome-wide analyses of UK Biobank retinal optical coherence tomography phenotypes.
  Seyedeh Maryam Zekavat, Saman Doroodgar Jorshery, Yusrah Shweikh, Katrin Horn, Franziska G Rauscher, Sayuri Sekimitsu, Satoshi Kayoma, Yixuan Ye, Vineet Raghu, Hongyu ...> ;Medrxiv. 2023 May 17
• Multi-trait genome-wide association analyses leveraging alcohol use disorder findings identify novel loci for smoking behaviors in the Million Veteran Program.
  Youshu Cheng, Cecilia Dao, Hang Zhou, Boyang Li, Rachel L Kember, Sylvanus Toikumo, Hongyu Zhao, Joel Gelernter, Henry R Kranzler, Amy C Justice, Ke Xu> ;Translational Psychiatry. 2023 May 5
• 5 citations
  Estimation on risk of spontaneous abortions by genomic disorders from a meta-analysis of microarray results on large case series of pregnancy losses.
  Gang Peng, Qinghua Zhou, Hongyan Chai, Jiadi Wen, Hongyu Zhao, Hugh S Taylor, Yong-Hui Jiang, Peining Li> ;Molecular Genetics & Genomic Medicine. 2023 Aug 1
• 13 citations
  A genome-wide association study of frailty identifies significant genetic correlation with neuropsychiatric, cardiovascular, and inflammation pathways.
  Yixuan Ye, Rommell B Noche, Natalia Szejko, Cameron P Both, Julian N Acosta, Audrey C Leasure, Kevin N Sheth, Thomas M Gill, Hongyu Zhao, Guido J Falcone, Brown, S., S...> ;Geroscience. 2023 Aug 1
• 2 citations
  Correlates of suicidal behaviors and genetic risk among United States veterans with schizophrenia or bipolar I disorder.
  Tim B Bigdeli, Peter B Barr, Nallakkandi Rajeevan, David P Graham, Yuli Li, Jacquelyn L Meyers, Bryan R Gorman, Roseann E Peterson, Frederick Sayward, Krishnan Radhakr...> ;Medrxiv. 2023 Mar 8
• 3 citations
  OTTERS: a powerful TWAS framework leveraging summary-level reference data.
  Qile Dai, Geyu Zhou, Hongyu Zhao, Urmo Võsa, Lude Franke, Alexis Battle, Alexander Teumer, Terho Lehtimäki, Olli T Raitakari, Tõnu Esko, , Michael P Epstein, Jingjing ...> ;Nature Communications. 2023 Mar 7
• 3 citations
  Live imaging reveals chromatin compaction transitions and dynamic transcriptional bursting during stem cell differentiation in vivo.
  Dennis May, Sangwon Yun, David G Gonzalez, Sangbum Park, Yanbo Chen, Elizabeth Lathrop, Biao Cai, Tianchi Xin, Hongyu Zhao, Siyuan Wang, Lauren E Gonzalez, Katie Cockb...> ;Elife. 2023 Mar 7
• 12 citations
  Massively parallel knock-in engineering of human T cells.
  Xiaoyun Dai, Jonathan J Park, Yaying Du, Zhenkun Na, Stanley Z Lam, Ryan D Chow, Paul A Renauer, Jianlei Gu, Shan Xin, Zhiyuan Chu, Cun Liao, Paul Clark, Hongyu Zhao, ...> ;Nature Biotechnology. 2023 Sep 1
• Genomic risk prediction of cardiovascular diseases among type 2 diabetes patients in the UK Biobank.
  Ye, Y., Hu, J., Pang, F., Zhao, H., Cui, C.> ;Frontiers in Bioinformatics. 2023 Jan 1
• Tolvaptan-induced isolated elevation of bilirubin in a patient with Gilbert syndrome.
  Matthew Nguyen, Beshoy T Yanny, Tai Ld Truong, Hongyu Zhao, Ramy Hanna> ;SAGE Open Medical Case Reports. 2023 Jan 1
• NLRP6 deficiency expands a novel CD103B cell population that confers immune tolerance in NOD mice.
  James A Pearson, Jian Peng, Juan Huang, Xiaoqing Yu, Ningwen Tai, Youjia Hu, Sha Sha, Richard A Flavell, Hongyu Zhao, F Susan Wong, Li Wen> ;Frontiers in Immunology. 2023 Jan 1
• 3 citations
  Association of Gulf War Illness with Characteristics in Deployed vs. Non-Deployed Gulf War Era Veterans in the Cooperative Studies Program 2006/Million Veteran Program...
  Linh M Duong, Alice B S Nono Djotsa, Jacqueline Vahey, Lea Steele, Rachel Quaden, Kelly M Harrington, Sarah T Ahmed, Renato Polimanti, Elani Streja, John Michael Gazia...> ;International Journal of Environmental Research and Public Health. 2022 Dec 24
• 1 citations
  A Markov random field model-based approach for differentially expressed gene detection from single-cell RNA-seq data.
  Biqing Zhu, Hongyu Li, Le Zhang, Sreeganga S Chandra, Hongyu Zhao> ;Briefings in Bioinformatics. 2022 Sep 20
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