JamesJCollinsMD

PubMed

• The recurrent deep intronic pseudoexon-inducing variantc.930+189C>T results in a consistently severe phenotype of COL6-related dystrophy: Towards clinical trial readin...
  A Reghan Foley, Véronique Bolduc, Fady Guirguis, Sandra Donkervoort, Ying Hu, Rotem Orbach, Riley M McCarty, Apurva Sarathy, Gina Norato, Beryl B Cummings, Monkol Lek,...> ;Medrxiv. 2024 Mar 29
• 4 citations
  Analysis of Schistosoma mansoni Extracellular Vesicles Surface Glycans Reveals Potential Immune Evasion Mechanism and New Insights on Their Origins of Biogenesis
  Maude Dagenais, Jared Q. Gerlach, George R Wendt, James J. Collins, Louise E. Atkinson, Angela Mousley, Timothy G. Geary, Thavy Long> ;Pathogens. 2021 Oct 29
• 28 citations
  RNA-responsive elements for eukaryotic translational control.
  Evan M. Zhao, Angelo S. Mao, Helena de Puig, Kehan Zhang, Nathaniel D. Tippens, Xiao Tan, F Ann Ran, Isaac Han, Peter Q. Nguyen, Emma J. Chory, Tiffany Y Hua, Pradeep ...> ;Nature Biotechnology. 2021 Oct 28
• 92 citations
  Engineering living therapeutics with synthetic biology.
  Andres Cubillos-Ruiz, Tingxi Guo, Anna Sokolovska, Paul F. Miller, James J. Collins, Timothy K. Lu, Jose M. Lora> ;Nature Reviews. Drug Discovery. 2021 Oct 6
• 48 citations
  Deep learning identifies synergistic drug combinations for treating COVID-19.
  Wengong Jin, Jonathan M. Stokes, Richard T. Eastman, Zina Itkin, Alexey V. Zakharov, James J. Collins, Tommi S. Jaakkola, Regina Barzilay> ;Proceedings of the National Academy of Sciences of the United States of America. 2021 Sep 28
• 145 citations
  Minimally instrumented SHERLOCK (miSHERLOCK) for CRISPR-based point-of-care diagnosis of SARS-CoV-2 and emerging variants.
  Helena de Puig, Rose A. Lee, Devora Najjar, Xiao Tan, Luis R. Soekensen, Nicolaas M. Angenent-Mari, Nina M. Donghia, Nicole E. Weckman, Audrey Ory, Carlos F. Ng, Peter...> ;Science Advances. 2021 Aug 6
• 15 citations
  SchistoCyte Atlas: A Single-Cell Transcriptome Resource for Adult Schistosomes
  George R Wendt, Michael L. Reese, James J. Collins> ;Trends in Parasitology. 2021 Jul 1
• 289 citations
  CRISPR-based diagnostics.
  Michael M. Kaminski, Omar O. Abudayyeh, Jonathan S. Gootenberg, Feng Zhang, James J. Collins> ;Nature Biomedical Engineering. 2021 Jul 1
• 185 citations
  Wearable materials with embedded synthetic biology sensors for biomolecule detection.
  Peter Q. Nguyen, Luis R. Soenksen, Nina M. Donghia, Nicolaas M. Angenent-Mari, Helena de Puig, Ally Huang, Rose A. Lee, Shimyn Slomovic, Tommaso Galbersanini, Geoffrey...> ;Nature Biotechnology. 2021 Jun 28
• 21 citations
  Designing Biological Circuits: Synthetic Biology Within the Operon Model and Beyond.
  Max A English, Raphael V. Gayet, James J. Collins> ;Annual Review of Biochemistry. 2021 Jun 21
• 35 citations
  Cytoplasmic condensation induced by membrane damage is associated with antibiotic lethality.
  Felix Wong, Jonathan M. Stokes, Bernardo Cervantes, Sider Penkov, Jens Friedrichs, Lars D. Renner, James J. Collins> ;Nature Communications. 2021 Apr 19
• 23 citations
  Racial disparities in COVID-19 mortality across Michigan, United States
  Alyssa S. Parpia, Isabel Martinez, Abdulrahman M. El-Sayed, Chad R. Wells, Lindsey Myers, Jeffrey Duncan, James J. Collins, Meagan C. Fitzpatrick, Alison P. Galvani, A...> ;Eclinicalmedicine. 2021 Mar 1
• 4 citations
  Schistosoma mansoni venom allergen-like protein 6 (SmVAL6) maintains tegumental barrier function.
  Samirah Perally, Kathrin K. Geyer, Priscila S.G. Farani, Iain W. Chalmers, Narcis Fernandez-Fuentes, Daniel R. Maskell, Benjamin J. Hulme, Josephine Forde-Thomas, Dyla...> ;International Journal for Parasitology. 2021 Mar 1
• 145 citations
  Clinically relevant mutations in core metabolic genes confer antibiotic resistance.
  Allison J. Lopatkin, Sarah C Bening, Abigail L. Manson, Jonathan M. Stokes, Michael A. Kohanski, Ahmed H. Badran, Ashlee M. Earl, Nicole J. Cheney, Jason H. Yang, Jame...> ;Science. 2021 Feb 19
• 34 citations
  Synthetic biology in the clinic: engineering vaccines, diagnostics, and therapeutics
  Xiao Tan, Justin H. Letendre, James J. Collins, Wilson W. Wong> ;Cell. 2021 Feb 18
• 40 citations
  Using deep learning for dermatologist-level detection of suspicious pigmented skin lesions from wide-field images.
  Luis R. Soenksen, Timothy Kassis, Susan T. Conover, Berta Marti-Fuster, Judith S. Birkenfeld, Jason M. Tucker-Schwartz, Asif Naseem, Robert Stavert, Caroline C. Kim, M...> ;Science Translational Medicine. 2021 Feb 17
• 53 citations
  Engineering advanced logic and distributed computing in human CAR immune cells
  Jang Hwan Cho, Atsushi Okuma, Katri Sofjan, Seunghee Lee, James J. Collins, Wilson W. Wong> ;Nature Communications. 2021 Feb 4
• 7 citations
  Anomalous COVID-19 tests hinder researchers.
  Lindsey R. Robinson-McCarthy, Alexander J. Mijalis, Gabriel T. Filsinger, Helena de Puig, Nina M. Donghia, Thomas E. Schaus, Robert A. Rasmussen, Raphael Ferreira, Jea...> ;Science. 2021 Jan 15
• 24 citations
  Deep-Learning Resources for Studying Glycan-Mediated Host-Microbe Interactions.
  Daniel Bojar, Rani K. Powers, Diogo M. Camacho, James J. Collins> ;Cell Host & Microbe. 2021 Jan 13
• 1 citations
  A critical review and meta-analysis of epidemiology studies of occupationally exposed styrene workers evaluated for chromosomal aberration incidence.
  James J. Collins, Martha M. Moore> ;Mutation Research. Genetic Toxicology and Environmental Mutagenesis. 2021 Jan 1
• 46 citations
  Eradicating Bacterial Persisters with Combinations of Strongly and Weakly Metabolism-Dependent Antibiotics
  Erica J. Zheng, Jonathan M. Stokes, James J. Collins> ;Cell Chemical Biology. 2020 Dec 17
• 64 citations
  Evidence that coronavirus superspreading is fat-tailed.
  Felix Wong, James J. Collins> ;Proceedings of the National Academy of Sciences of the United States of America. 2020 Nov 24
• 57 citations
  A deep learning approach to programmable RNA switches.
  Nicolaas M. Angenent-Mari, Alexander S. Garruss, Luis R. Soenksen, George M. Church, James J. Collins> ;Nature Communications. 2020 Oct 7
• 41 citations
  Large-scale RNAi screening uncovers therapeutic targets in the parasite Schistosoma mansoni
  Jipeng Wang, Carlos Paz, Gilda Padalino, Avril Coghlan, Zhigang Lu, Irina Gradinaru, Julie N. R. Collins, Matthew Berriman, Karl F. Hoffmann, James J. Collins> ;Science. 2020 Sep 25
• 78 citations
  A single-cell RNA-seq atlas of Schistosoma mansoni identifies a key regulator of blood feeding.
  George R Wendt, Lu Zhao, Rui Chen, Chenxi Liu, Anthony J. O’Donoghue, Conor R. Caffrey, Michael L. Reese, James J. Collins> ;Science. 2020 Sep 25
• Join now to see all