JenniferLynnReedMD

PubMed

• Distal respiratory tract viral infections in young children trigger a marked increase in alveolar mast cells.
  Andersson, C. K.,Shikhagaie, M.,Mori, M.,Al-Garawi, A.,Reed, J. L.,Humbles, A. A.,Welliver, R.,Mauad, T.,Bjermer, L.,Jordana, M.,Erjefält, J. S.> ;ERJ Open Res. 2018 Nov 28
• A framework for the identification of promising bio-based chemicals.
  Wu, W.,Long, M. R.,Zhang, X.,Reed, J. L.,Maravelias, C. T.> ;Biotechnol. Bioeng.. 2018 Jun 26
• Characterization of Source Plasma from Self-Identified Vaccinated or Convalescent Donors During the 2009 H1N1 Pandemic
  Jennifer L Reed> ;Transfusion. 2018 Feb 16
• Advances in gap-filling genome-scale metabolic models and model-driven experiments lead to novel metabolic discoveries.
  Pan, S.,Reed, J. L.> ;Curr. Opin. Biotechnol.. 2017 Dec 27
• Flux Balance Analysis Indicates that Methane Is the Lowest Cost Feedstock for Microbial Cell Factories.
  Comer, A. D.,Long, M. R.,Reed, J. L.,Pfleger, B. F.> ;Metab Eng Commun. 2017 Oct 11
• Metabolic assessment of E. coli as a Biofactory for commercial products.
  Zhang, X.,Tervo, C. J.,Reed, J. L.> ;Metab. Eng.. 2016 Feb 07
• Computational methods in metabolic engineering for strain design.
  Long, M. R.,Ong, W. K.,Reed, J. L.> ;Curr. Opin. Biotechnol.. 2015 Jan 13
• Refining metabolic models and accounting for regulatory effects.
  Kim, J.,Reed, J. L.> ;Curr. Opin. Biotechnol.. 2014 Mar 19
• Vaccinia virus induces rapid necrosis in keratinocytes by a STAT3-dependent mechanism.
  He Y, Fisher R, Chowdhury S, Sultana I, Pereira CP, Bray M, Reed JL> ;PLoS ONE. 2014-01-01
• Software platforms to facilitate reconstructing genome-scale metabolic networks.
  Hamilton, J. J.,Reed, J. L.> ;Environ. Microbiol.. 2013 Oct 24
• Quantitative assessment of thermodynamic constraints on the solution space of genome-scale metabolic models.
  Hamilton, J. J.,Dwivedi, V.,Reed, J. L.> ;Biophys. J.. 2013 Jul 16
• Computational evaluation of Synechococcus sp. PCC 7002 metabolism for chemical production.
  Vu, T. T.,Hill, E. A.,Kucek, L. A.,Konopka, A. E.,Beliaev, A. S.,Reed, J. L.> ;Biotechnol J. 2013 May
• BioMog: a computational framework for the de novo generation or modification of essential biomass components.
  Tervo CJ, Reed JL> ;PLoS ONE. 2013-01-01
• Shrinking the metabolic solution space using experimental datasets.
  Reed, J. L.> ;PLoS Comput Biol. 2012
• Identification of functional differences in metabolic networks using comparative genomics and constraint-based models.
  Hamilton, J. J., Reed, J. L.> ;PLoS ONE. 2012
• Genome-Scale Modeling of Light-Driven Reductant Partitioning and Carbon Fluxes in Diazotrophic Unicellular Cyanobacterium Cyanothece sp. ATCC 51142.
  Vu, T. T., Stolyar, S. M., Pinchuk, G. E., Hill, E. A., Kucek, L. A., Brown, R. N., Lipton, M. S., Osterman, A., Fredrickson, J. K., Konopka, A. E., Beliaev, A. S., Re...> ;PLoS Comput Biol. 2012
• Cytosolic, autocrine alpha-1 proteinase inhibitor (A1PI) inhibits caspase-1 and blocks IL-1β dependent cytokine release in monocytes.
  Wang Y, He Y, Abraham B, Rouhani FN, Brantly ML, Scott DE, Reed JL> ;PLoS ONE. 2012-01-01
• Large-scale bi-level strain design approaches and mixed-integer programming solution techniques.
  Kim J, Reed JL, Maravelias CT> ;PLoS ONE. 2011-01-01
• Macrophage Impairment Underlies Airway Occlusion in Primary Respiratory Syncytial Virus Bronchiolitis
  Jennifer Reed, MD> ;British Journal of Anaesthesia. 2008 Nov 05
• Effect of variation of the strength of the aromatic interactions of tryptophan on the cooperative structural refolding behavior of a peptide from HIV 1.
  Schweizer S, Reed J> ;Biophys. J.. 2008-10-01
• Analysis of metabolic capabilities using singular value decomposition of extreme pathway matrices.
  Price ND, Reed JL, Papin JA, Famili I, Palsson BO> ;Biophys. J.. 2003-02-01
• Genome -Scale Reconstruction of Metabolic Networks of Lactobacillus casei ATCC 334 and 12A.
  Vinay-Lara, E.,Hamilton, J. J.,Stahl, B.,Broadbent, J. R.,Reed, J. L.,Steele, J. L.> ;PLoS ONE. 2014 Nov 05
• Descriptive and predictive applications of constraint-based metabolic models.
  Reed, J. L.> ;Conf Proc IEEE Eng Med Biol Soc. 2009 Dec 08
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