JoseClementeMD

PubMed

• 8 citations
  Traditional Farming Lifestyle in Old Older Mennonites Modulates Human Milk Composition.
  Antti Seppo, Rakin A Choudhury, Catherine Pizzarello, Rohith Palli, Sade Fridy, Puja Sood Rajani, Jessica Stern, Camille A. Martina, Chloe Yonemitsu, Lars Bode, Kevin ...> ;Frontiers in Immunology. 2021 Oct 11
• 6 citations
  An integrative study of the microbiome gut-brain-axis and hippocampal inflammation in psychosis: Persistent effects from mode of birth
  Peter Joe, Jose C. Clemente, Enrica Piras, David S. Wallach, Jessica Robinson-Papp, Emeka Boka, Brooke Remsen, Mharisi Bonner, David Kimhy, Deborah Goetz, Kevin W. Hof...> ;Schizophrenia Research. 2021 Oct 5
• Viral Inactivation Impacts Microbiome Estimates in a Tissue-Specific Manner.
  Alba Boix-Amorós, Enrica Piras, Kevin Bu, David S. Wallach, Matthew Stapylton, Ana Fernandez-Sesma, Dolores Malaspina, Jose C. Clemente> ;Msystems. 2021 Oct 26
• 2 citations
  Prenatal ambient temperature and risk for schizophrenia.
  Jennifer Puthota, Andrea Alatorre, Samantha Walsh, Jose C. Clemente, Dolores Malaspina, Julie Spicer> ;Schizophrenia Research. 2021 Oct 4
• 52 citations
  Precise quantification of bacterial strains after fecal microbiota transplantation delineates long-term engraftment and explains outcomes.
  Varun Aggarwala, Ilaria Mogno, Zhihua Li, Chao Yang, Graham J. Britton, Alice Chen-Liaw, Josephine Mitcham, Gerold Bongers, Dirk Gevers, Jose C. Clemente, Jean-Frederi...> ;Nature Microbiology. 2021 Sep 27
• 75 citations
  Microbial signatures in the lower airways of mechanically ventilated COVID-19 patients associated with poor clinical outcome.
  Imran Sulaiman, Matthew Chung, Luis Angel, Jun-Chieh J. Tsay, Benjamin G. Wu, Stephen T. Yeung, Kelsey Krolikowski, Yonghua Li, Ralf Duerr, R. Schluger, Sara A Thannic...> ;Nature Microbiology. 2021 Aug 31
• 2 citations
  Infant Nasopharyngeal Microbiota Subphenotypes and Early Childhood Lung Function: Evidence from a Rural Ghanaian Pregnancy Cohort.
  Kathryn Dubowski, Seyram Kaali, Darby Jack, Rebecca Kyerewaa Dwommoh Prah, Jose C. Clemente, Theresa Tawiah, Mohammed Mujtaba, Louisa Fatahiya Iddrisu, Daniel Carrión,...> ;International Journal of Environmental Research and Public Health. 2021 Jul 7
• 14 citations
  Detecting and phasing minor single-nucleotide variants from long-read sequencing data.
  Zhixing Feng, Jose C. Clemente, Brandon Wong, Eric E. Schadt> ;Nature Communications. 2021 May 24
• 19 citations
  Anaerobe-enriched gut microbiota predicts pro-inflammatory responses in pulmonary tuberculosis.
  Naidoo C, Georgina R Nyawo, Imran Sulaiman, Benjamin G. Wu, Carolin T. Turner, Kevin Bu, Zaida Palmer, Yonghua Li, Byron W.P. Reeve, Suventha Moodley, Jennifer G. Jack...> ;Ebiomedicine. 2021 May 1
• 24 citations
  Infant gut microbiome is enriched with Bifidobacterium longum ssp. infantis in Old Order Mennonites with traditional farming lifestyle.
  Antti Seppo, Kevin Bu, Madina Jumabaeva, Juilee Thakar, Rakin A Choudhury, Chloe Yonemitsu, Lars Bode, Camille A. Martina, Maria Allen, Sabrina Tamburini, Enrica Piras...> ;Allergy. 2021 Apr 27
• 2 citations
  Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome.
  Imran Sulaiman, Matthew Chung, Luis F. Angel, Sergei B. Koralov, Benjamin G. Wu, Stephen T. Yeung, Kelsey Krolikowski, Yonghua Li, Ralf Duerr, R. Schluger, Sara A Than...> ;Research Square. 2021 Mar 29
• 17 citations
  Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome
  Imran Sulaiman, Matthew Chung, Luis Angel, Jun-Chieh J. Tsay, Benjamin G. Wu, Stephen T. Yeung, Kelsey Krolikowski, Yonghua Li, Ralf Duerr, R. Schluger, Sara A Thannic...> ;Medrxiv. 2021 Feb 26
• 112 citations
  Lower Airway Dysbiosis Affects Lung Cancer Progression.
  Jun Chieh J. Tsay, Benjamin G. Wu, Imran Sulaiman, Katherine Gershner, R. Schluger, Yonghua Li, Ting An Yie, Peter Meyn, E. Olsen, Luisannay Perez, B. Franca, J. Carpe...> ;Cancer Discovery. 2021 Feb 1
• 12 citations
  Composite Score of Healthy Lifestyle Factors and Risk of Hepatocellular Carcinoma: Findings from a Prospective Cohort Study.
  Hung N. Luu, Jaideep Behari, George Boon-Bee Goh, Renwei Wang, Aizhen Jin, Claire E. Thomas, Jose C. Clemente, Andrew O. Odegaard, Woon-Puay Koh, Jian-Min Yuan> ;Cancer Epidemiology, Biomarkers & Prevention. 2021 Feb 1
• 28 citations
  Functional lower airways genomic profiling of the microbiome to capture active microbial metabolism
  Imran Sulaiman, Benjamin G. Wu, Yonghua Li, Jun-Chieh J. Tsay, M. Sauthoff, A.S. Scott, Kun Ji, Sergei B. Koralov, Michael D. Weiden, Jose C. Clemente, Drew R. Jones, ...> ;The European Respiratory Journal. 2021 Jul 1
• 49 citations
  Immunoglobulin A Targets a Unique Subset of the Microbiota in Inflammatory Bowel Disease.
  Jason Shapiro, Marcel R. de Zoete, Noah W. Palm, Yaro Laenen, Rene Bright, Meaghan Mallette, Kevin Bu, Agata A. Bielecka, Fang Xu, Andrés Hurtado-Lorenzo, Samir A. Sha...> ;Cell Host & Microbe. 2021 Jan 13
• 13 citations
  Evidence for Environmental–Human Microbiota Transfer at a Manufacturing Facility with Novel Work-related Respiratory Disease
  Benjamin G. Wu, Bianca Kapoor, Kristin J. Cummings, Marcia L. Stanton, Randall J. Nett, Kathleen Kreiss, Jerrold L. Abraham, Thomas V. Colby, Angela Franko, Francis H....> ;American Journal of Respiratory and Critical Care Medicine. 2020 Dec 15
• 25 citations
  Episodic Aspiration with Oral Commensals Induces a MyD88-dependent, Pulmonary T-Helper Cell Type 17 Response that Mitigates Susceptibility to Streptococcus pneumoniae.
  Benjamin G. Wu, Imran Sulaiman, Jun Chieh J. Tsay, L. Perez, B. Franca, Yonghua Li, Jing Wang, Amber N. Gonzalez, Mariam El-Ashmawy, J. Carpenito, E. Olsen, M. Sauthof...> ;American Journal of Respiratory and Critical Care Medicine. 2021 Apr 30
• 10 citations
  Quality diet indexes and risk of hepatocellular carcinoma: Findings from the Singapore Chinese Health Study
  Hung N. Luu, Nithya Neelakantan, Tingting Geng, Renwei Wang, George Boon-Bee Goh, Jose C. Clemente, Aizhen Jin, Rob M. van Dam, Wei Jia, Jaideep Behari, Woon-Puay Koh,...> ;International Journal of Cancer. 2021 May 1
• 44 citations
  Defined microbiota transplant restores Th17/RORγt+ regulatory T cell balance in mice colonized with inflammatory bowel disease microbiotas
  Graham J. Britton, Eduardo J. Contijoch, Matthew P. Spindler, Varun Aggarwala, Belgin Dogan, Gerold Bongers, Lani San Mateo, Andrew Baltus, Anuk Das, Dirk Gevers, Thom...> ;Proceedings of the National Academy of Sciences of the United States of America. 2020 Sep 1
• Editorial overview: Microbiota united-bacteria, fungi and host responses come into focus.
  Jose C. Clemente, Iliyan D. Iliev> ;Current Opinion in Microbiology. 2020 Aug 1
• 91 citations
  Fungal Trans-kingdom Dynamics Linked to Responsiveness to Fecal Microbiota Transplantation (FMT) Therapy in Ulcerative Colitis.
  Irina Leonardi, Sudarshan Paramsothy, Itai Doron, Alexa Semon, Nadeem O. Kaakoush, Jose C. Clemente, Jeremiah J. Faith, Thomas J. Borody, Hazel M. Mitchell, Jean-Frede...> ;Cell Host & Microbe. 2020 May 13
• 18 citations
  A dietary intervention to improve the microbiome composition of pregnant women with Crohn's disease and their offspring: The MELODY (Modulating Early Life Microbiome t...
  Inga Peter, Ana Maldonado-Contreras, Caroline Eisele, Christine F. Frisard, Shauna Simpson, Nilendra Nair, Alexa Rendon, Kelly Hawkins, Caitlin Cawley, Anketse Debebe,...> ;Contemporary Clinical Trials Communications. 2020 May 4
• 48 citations
  Interleukin-17 Inhibition in Spondyloarthritis Is Associated With Subclinical Gut Microbiome Perturbations and a Distinctive Interleukin-25-Driven Intestinal Inflammat...
  , , , , , , , , , , , , , , , , , , , > ;Arthritis & Rheumatology. 2020 Apr 1
• 66 citations
  Methods in Lung Microbiome Research
  Sharon M. Carney, Jose C. Clemente, Michael J. Cox, Robert P. Dickson, Yvonne J. Huang, Georgios D Kitsios, Kirsten M. Kloepfer, Janice M. Leung, Tricia D. LeVan, Phil...> ;American Journal of Respiratory Cell and Molecular Biology. 2020 Mar 1
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