MalakAbedalthagafiMDMBA

PubMed

• A case of myxopapillary ependymoma with predominant giant cell morphology: A rare entity with comprehensive genomic profiling and review of literature.
  Bryan Morales-Vargas, Hassan Saad, Zied Abdullaev, Kenneth Aldape, Daniel Refai, Matthew Schniederjan, Malak Abedalthagafi> ;Neuropathology. 2024 Apr 19
• Packaging and containerization of computational methods.
  Mohammed Alser, Brendan Lawlor, Richard J Abdill, Sharon Waymost, Ram Ayyala, Neha Rajkumar, Nathan LaPierre, Jaqueline Brito, André M Ribeiro-Dos-Santos, Nour Almadho...> ;Nature Protocols. 2024 Apr 2
• Artificial intelligence in neuro-oncology: advances and challenges in brain tumor diagnosis, prognosis, and precision treatment.
  Sirvan Khalighi, Kartik Reddy, Abhishek Midya, Krunal Balvantbhai Pandav, Anant Madabhushi, Malak Abedalthagafi> ;NPJ Precision Oncology. 2024 Mar 29
• Fusing Peptide Epitopes for Advanced Multiplex Serological Testing for SARS-CoV-2 Antibody Detection.
  Aldoukhi, A., Bilalis, P., Alhattab, D., Valle-Pérez, A., Susapto, H., Pérez-Pedroza, R., Backhoff-García, E., Alsawaf, S., Alshehri, S., Boshah, H., Alrashoudi, A., A...> ;ACS Bio & Med Chem Au. 2024 Feb 21
• 1 citations
  Fabrication of a three-dimensional bone marrow niche-like acute myeloid Leukemia disease model by an automated and controlled process using a robotic multicellular bio...
  Dana M Alhattab, Ioannis Isaioglou, Salwa Alshehri, Zainab N Khan, Hepi H Susapto, Yanyan Li, Yara Marghani, Arwa A Alghuneim, Rubén Díaz-Rúa, Sherin Abdelrahman, Shur...> ;Biomaterials Research. 2023 Nov 6
• Ameloblastic Fibrosarcoma of the Jaw: Case Report, Genetic Profiling, and Literature Review.
  Duna Barakeh, Afaf Alsolami, Malak Abedalthagafi> ;Case Reports in Oncology. 2023 Nov 6
• The Genomic Landscape of Colorectal Cancer in the Saudi Arabian Population Using a Comprehensive Genomic Panel.
  Ebtehal Alsolme, Saleh Alqahtani, Musa Fageeh, Duna Barakeh, Nitesh K Sharma, Serghei Mangul, Heather A Robinson, Amany Fathaddin, Charlotte A E Hauser, Malak Abedalth...> ;Diagnostics. 2023 Sep 19
• Analytical code sharing practices in biomedical research.
  Nitesh Kumar Sharma, Ram Ayyala, Dhrithi Deshpande, Yesha M Patel, Viorel Munteanu, Dumitru Ciorba, Andrada Fiscutean, Mohammad Vahed, Aditya Sarkar, Ruiwei Guo, Andre...> ;Biorxiv. 2023 Aug 7
• 5 citations
  Rigorous benchmarking of T-cell receptor repertoire profiling methods for cancer RNA sequencing.
  Kerui Peng, Theodore S Nowicki, Katie Campbell, Mohammad Vahed, Dandan Peng, Yiting Meng, Anish Nagareddy, Yu-Ning Huang, Aaron Karlsberg, Zachary Miller, Jaqueline Br...> ;Briefings in Bioinformatics. 2023 Jul 20
• 2 citations
  Non-invasive prenatal testing: a revolutionary journey in prenatal testing.
  Shahad Bawazeer, Romy I Fawaz, A Merrihew Heritage, Nouf M Alajaji, Eissa Faqeih, Abedalthagafi, M.> ;Frontiers in Medicine. 2023 Jan 1
• Editorial: Women in science: Genetics.
  Jaira Ferreira de Vasconcellos, Malak Abedalthagafi, Silvia Calo, Rana Dajani, Zodwa Dlamini, Bertha Hidalgo, Carine Le Goff, Aparna Vasanthakumar> ;Frontiers in Genetics. 2022 Jan 1
• 9 citations
  The Saudi Critical Care Society practice guidelines on the management of COVID-19 in the ICU: Therapy section.
  Waleed Alhazzani, Mohammed Alshahrani, Fayez Alshamsi, Ohoud Aljuhani, Khalid Eljaaly, Samaher Hashim, Rakan M. AlQahtani, Doaa Alsaleh, Zainab Al Duhailib, Haifa Alge...> ;Journal of Infection and Public Health. 2021 Oct 20
• 78 citations
  A Molecularly Integrated Grade for Meningioma.
  Joseph Driver, Samantha E Hoffman, Sherwin Tavakol, Eleanor Woodward, Eduardo A Maury, Varun Bhave, Noah F. Greenwald, Farshad Nassiri, Kenneth Aldape, Gelareh Zadeh, ...> ;Neuro-Oncology. 2021 Sep 11
• 3 citations
  Fabrication of a Lateral Flow Assay for Rapid In-Field Detection of COVID-19 Antibodies Using Additive Manufacturing Printing Technologies.
  Abdulelah A Alrashoudi, Hamed I. Albalawi, Ali H Aldoukhi, Manola Moretti, Panayiotis Bilalis, Malak Abedalthagafi, Charlotte A. E. Hauser> ;International Journal of Bioprinting. 2021 Aug 23
• 47 citations
  Rare loss-of-function variants in type I IFN immunity genes are not associated with severe COVID-19
  Gundula Povysil, Guillaume Butler-Laporte, Ning Shang, Chen Wang, Atlas Khan, Manal Alaamery, Tomoko Nakanishi, Sirui Zhou, Vincenzo Forgetta, Robert Eveleigh, Mathieu...> ;The Journal of Clinical Investigation. 2021 Jul 15
• 28 citations
  Diversity in immunogenomics: the value and the challenge.
  Kerui Peng, Yana Safonova, Mikhail Shugay, Alice B. Popejoy, Oscar L. Rodriguez, Felix Breden, Petter Brodin, Amanda M. Burkhardt, Carlos Bustamante, Van Mai Cao-Lorme...> ;Nature Methods. 2021 May 17
• 10 citations
  Epigenomics and immunotherapeutic advances in pediatric brain tumors
  Malak Abedalthagafi, Nahla Ali Mobark, May Alrashed, Musa Alharbi> ;NPJ Precision Oncology. 2021 Apr 30
• 1 citations
  Unlocking capacities of viral genomics for the COVID-19 pandemic response
  Sergey Knyazev, Karishma Chhugani, Ram Ayyala, Harman Singh, Smruthi Karthikeyan, Dhrithi Deshpande, Zoia Comarova, Angela Lu, Varuni Sarwal, Yuri B. Porozov, Aiping W...> ;Arxiv. 2021 Apr 28
• 13 citations
  Improving the completeness of public metadata accompanying omics studies.
  Anushka Rajesh, Yutong Chang, Malak Abedalthagafi, Annie Wong-Beringer, Michael I. Love, Serghei Mangul> ;Genome Biology. 2021 Apr 15
• 5 citations
  Landscape of somatic mutations in breast cancer: new opportunities for targeted therapies in Saudi Arabian patients.
  Duna Barakeh, Rasha Aljelaify, Yara Bashawri, Amal Almutairi, Fatimah Alqubaishi, Mohammed Alnamnakani, Latifa AlMubarak, Abdulrahman Al Naeem, Fatema Almushawah, May ...> ;Oncotarget. 2021 Mar 30
• 11 citations
  Immune profiling of pituitary tumors reveals variations in immune infiltration and checkpoint molecule expression.
  Yu Mei, Wenya Linda Bi, James Agolia, Changchen Hu, Alexandra M Giantini Larsen, David Meredith, Sally Al Abdulmohsen, Tejus Bale, Gavin P. Dunn, Malak Abedalthagafi, ...> ;Pituitary. 2021 Jan 25
• The clinico-pathologic profile of primary and recurrent orbital/periorbital plexiform neurofibromas (OPPN).
  Mohammad A. Alabduljabbar, Diego Strianese, Osama Al-Sheikh, Hind M. Alkatan, Hailah Al-Hussain, Azza Maktabi, Rajiv Khandekar, Malak Abedalthagafi, Deepak P. Edward> ;Plos One. 2021 Oct 21
• Editorial: Genomics and Epigenomics of Cancer Immunotherapy: Challenges and Clinical Implications.
  Malak Abedalthagafi> ;Frontiers in Oncology. 2021 Jan 1
• 42 citations
  Primary mismatch repair deficient IDH-mutant astrocytoma (PMMRDIA) is a distinct type with a poor prognosis
  Abigail K. Suwala, Damian Stichel, Daniel Schrimpf, Matthias Kloor, Annika K. Wefers, Annekathrin Reinhardt, Sybren L. N. Maas, Christian P. Kratz, Leonille Schweizer,...> ;Acta Neuropathologica. 2021 Jan 1
• 10 citations
  Failure to replicate the association of rare loss-of-function variants in type I IFN immunity genes with severe COVID-19
  Gundula Povysil, Guillaume Butler-Laporte, Ning Shang, Chen Weng, Atlas Khan, Manal Alaamery, Tomoko Nakanishi, Sirui Zhou, Vincenzo Forgetta, Robert Eveleigh, Mathieu...> ;Medrxiv. 2020 Dec 21
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