S. WesleyWesleyLongMDPhD

PubMed

• Within-host genetic diversity of SARS-CoV-2 in the context of large-scale hospital-associated genomic surveillance.
  Alexandra A Mushegian, Scott W Long, Randall J Olsen, Paul A Christensen, Sishir Subedi, Matthew Chung, James Davis, James Musser, Elodie Ghedin> ;Medrxiv. 2022 Aug 19
• Classification of cervical biopsy free-text diagnoses through linear-classifier based natural language processing.
  Jim Wei-Chun Hsu, Paul Christensen, Yimin Ge, S Wesley Long> ;Journal of Pathology Informatics. 2022 Jan 1
• 34 citations
  Analysis of the ARTIC Version 3 and Version 4 SARS-CoV-2 Primers and Their Impact on the Detection of the G142D Amino Acid Substitution in the Spike Protein.
  James J Davis, S Wesley Long, Paul A Christensen, Randall J Olsen, Robert Olson, Maulik Shukla, Sishir Subedi, Rick Stevens, James M Musser> ;Microbiology Spectrum. 2021 Dec 22
• 75 citations
  Delta variants of SARS-CoV-2 cause significantly increased vaccine breakthrough COVID-19 cases in Houston, Texas.
  Paul A. Christensen, Randall J. Olsen, S. Wesley Long, Sishir Subedi, James J. Davis, Parsa Hodjat, Debbie R. Walley, Jacob C. Kinskey, Matthew Ojeda Saavedra, Layne P...> ;The American Journal of Pathology. 2021 Nov 10
• 27 citations
  The Reemergence of Seasonal Respiratory Viruses in Houston, Texas, after Relaxing COVID-19 Restrictions.
  Parsa Hodjat, Paul A. Christensen, Sishir Subedi, David W. Bernard, Randall J. Olsen, S. Wesley Long> ;Microbiology Spectrum. 2021 Sep 8
• 15 citations
  Trajectory of Growth of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants in Houston, Texas, January through May 2021, Based on 12,476 Genome Seque...
  Randall J. Olsen, Paul A. Christensen, S. Wesley Long, Sishir Subedi, Parsa Hodjat, Robert Olson, Marcus Nguyen, James J. Davis, Prasanti Yerramilli, Matthew Ojeda Saa...> ;The American Journal of Pathology. 2021 Jul 23
• 28 citations
  Sequence Analysis of 20,453 Severe Acute Respiratory Syndrome Coronavirus 2 Genomes from the Houston Metropolitan Area Identifies the Emergence and Widespread Distribu...
  S. Wesley Long, Randall J. Olsen, Paul A. Christensen, Sishir Subedi, Robert Olson, James J. Davis, Matthew Ojeda Saavedra, Prasanti Yerramilli, Layne Pruitt, Kristina...> ;The American Journal of Pathology. 2021 Mar 16
• Implementing flowDensity for Automated Analysis of Bone Marrow Lymphocyte Population.
  Ghazaleh Eskandari, Sishir Subedi, Paul Christensen, Randall J Olsen, Youli Zu, Scott W Long> ;Journal of Pathology Informatics. 2021 Jan 1
• 129 citations
  Convalescent plasma anti–SARS-CoV-2 spike protein ectodomain and receptor-binding domain IgG correlate with virus neutralization
  Eric Salazar, Suresh V. Kuchipudi, Paul A. Christensen, Todd N. Eagar, Xin Yi, Picheng Zhao, Zhicheng Jin, S. Wesley Long, Randall J. Olsen, Jian Chen, Brian Castillo,...> ;The Journal of Clinical Investigation. 2020 Dec 1
• 1 citations
  The Ongoing Threat of Methicillin-Resistant Staphylococcus aureus
  S Wesley Long> ;The Journal of Infectious Diseases. 2020 Nov 13
• 2 citations
  Predicting β-lactam Resistance using Whole Genome Sequencing in Klebsiella pneumoniae: the challenge of β-lactamase inhibitors
  Andrea M. Hujer, S. Wesley Long, Randall J. Olsen, Magdalena A. Taracila, Laura J. Rojas, James M. Musser, Robert A. Bonomo> ;Diagnostic Microbiology and Infectious Disease. 2020 Nov 1
• 51 citations
  Molecular Architecture of Early Dissemination and Massive Second Wave of the SARS-CoV-2 Virus in a Major Metropolitan Area.
  S. Wesley Long, Randall J. Olsen, Paul A. Christensen, David W. Bernard, James J. Davis, Maulik Shukla, Marcus Nguyen, Matthew Ojeda Saavedra, Prasanti Yerramilli, Lay...> ;Mbio. 2020 Oct 30
• 9 citations
  Carbapenems drive the collateral resistance to ceftaroline in cystic fibrosis patients with MRSA
  Maria Celeste Varela, Melanie Roch, Agustina Taglialegna, Scott Wesley Long, Matthew Ojeda Saavedra, Warren E. Rose, James J. Davis, Lucas R. Hoffman, Rafael E Hernand...> ;Communications Biology. 2020 Oct 22
• 58 citations
  Molecular Architecture of Early Dissemination and Massive Second Wave of the SARS-CoV-2 Virus in a Major Metropolitan Area
  Scott Wesley Long, Randall J. Olsen, Paul A. Christensen, David W. Bernard, James J. Davis, Maulik Shukla, Marcus Nguyen, Matthew Ojeda Saavedra, Prasanti Yerramilli, ...> ;Medrxiv. 2020 Sep 29
• 10 citations
  Pathology Trainee Redeployment and Education During the COVID-19 Pandemic: An Institutional Experience
  Paloma del C. Monroig-Bosque, Jim W. Hsu, Michelle S. Lin, Ahmed Shehabeldin, John Rogers, Charlotte F. Kim, Ayaz G. Kalsekar, Zhicheng Jin, Lukas R. Cara, Andreia N. ...> ;Academic Pathology. 2020 Sep 18
• 21 citations
  Role of Rapid Diagnostics in Diagnosis and Management of Patients With Sepsis.
  Taryn A Eubank, Scott Wesley Long, Katherine K. Perez> ;The Journal of Infectious Diseases. 2020 Jul 21
• Development and validation of Houston Methodist Variant Viewer version 3: updates to our application for interpretation of next-generation sequencing data
  Paul A. Christensen, Sishir Subedi, Kristi Pepper, Heather Hendrickson, Zejuan Li, Jessica S. Thomas, S. Wesley Long, Randall J. Olsen> ;JAMIA Open. 2020 Jul 1
• 59 citations
  Relationship between Anti-Spike Protein Antibody Titers and SARS-CoV-2 In Vitro Virus Neutralization in Convalescent Plasma
  Eric Salazar, Suresh V. Kuchipudi, Paul A. Christensen, Todd N. Eagar, Xin Yi, Picheng Zhao, Zhicheng Jin, S. Wesley Long, Randall J. Olsen, Jian Chen, Brian Castillo,...> ;Biorxiv. 2020 Jun 9
• 143 citations
  Treatment of Coronavirus Disease 2019 (COVID-19) Patients with Convalescent Plasma.
  Eric Salazar, Katherine K. Perez, Madiha Ashraf, Jian Chen, Brian Castillo, Paul A. Christensen, Taryn A Eubank, David W. Bernard, Todd N. Eagar, S. Wesley Long, Sishi...> ;The American Journal of Pathology. 2020 Aug 1
• 79 citations
  Treatment of COVID-19 Patients with Convalescent Plasma in Houston, Texas
  Eric Salazar, Katherine K. Perez, Madiha Ashraf, Jian Chen, Brian Castillo, Paul A. Christensen, Taryn A Eubank, David W. Bernard, Todd N. Eagar, Scott Wesley Long, Si...> ;Medrxiv. 2020 May 13
• 1 citations
  Human Infections Caused by Clonally Related African Clade (Clade III) Strains of Candida auris in the Greater Houston Region.
  S. Wesley Long, Matthew Ojeda Saavedra, Paul A. Christensen, James M. Musser, Randall J. Olsen> ;Journal of Clinical Microbiology. 2020 Jun 24
• 3 citations
  Development and evaluation of a novel protein-based assay for specific detection of KPC β-lactamases from Klebsiella pneumoniae clinical isolates
  Shuo Lu, Victoria Soeung, Hoang A. T. Nguyen, S. Wesley Long, James M. Musser, Timothy Palzkill> ;Msphere. 2020 Jan 1
• 4 citations
  Draft Genome Sequence of Candida auris Strain LOM, a Human Clinical Isolate from Greater Metropolitan Houston, Texas
  S. Wesley Long, Randall J. Olsen, Hoang A. T. Nguyen, Matthew Ojeda Saavedra, James M. Musser> ;Microbiology Resource Announcements. 2019 Jun 20
• 47 citations
  Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyogenes pathogenesis
  Priyanka Kachroo, Jesus M. Eraso, Stephen B. Beres, Randall J. Olsen, Luchang Zhu, Waleed Nasser, Paul E. Bernard, Concepcion C. Cantu, Matthew Ojeda Saavedra, Maria J...> ;Nature Genetics. 2019 Mar 1
• 2 citations
  Real-time Communication With Health Care Providers Through an Online Respiratory Pathogen Laboratory Report.
  Paul A. Christensen, Randall J. Olsen, Katherine K. Perez, Patricia L. Cernoch, S. Wesley Long> ;Open Forum Infectious Diseases. 2018 Nov 30
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Journal Articles

• PBP2a mutations causing high-level ceftaroline resistance in clinical methicillin-resistant Staphylococcus aureus isolates  
  Long, S.W., R.J. Olsen, S.C. Mehta, T.G. Palzkill, P.L. Cernoch, K.K. Perez, W.L. Musick, A.E. Rosato, J.M. Musser, Antimicrob Agents Chemother, 1/25/2014
• Clinical laboratory response to a mock outbreak of invasive bacterial infections: A preparedness study  
  Olsen, R.J., N. Fittipaldi, P. Kachroo, M.A. Sanson, S.W. Long, K.J. Como-Sabetti, C. Valson, C. Cantu, R. Lynfield, C. Van Beneden, S.B. Beres, J.M. Musser., J Clin Microbiol, 1/24/2014
• Improving positive blood culture removal time significantly decreases total processing time  
  Salazar, E., M. Divatia, P.L. Cernoch, R.J. Olsen, S.W. Long, G.A. Land, J.R. Davis, J.M. Musser., Arch Pathol Lab Med, 1/7/2014
• Absence of patient-to-patient intrahospital transmission of Staphylococcus aureus as determined by whole-genome sequencing  
  Long, S.W., S.B. Beres, R.J. Olsen, J.M. Musser., mBio, 1/7/2014
• Identification of point mutations in clinical Staphylococcus aureus strains that produce small colony variants auxotrophic for menadione  
  Dean, M.A., R.J. Olsen, S.W. Long, A.E. Rosato, J.M. Musser., Infect Immun., 1/1/2014
• Evolutionary pathway to increased virulence and epidemic group A Streptococcus disease derived from 3,615 genome sequences  
  Nasser, W., S.B. Beres, R.J. Olsen, M.A. Dean, K.A. Rice, S.W. Long, K.G. Kristinsson, M. Gottfredsson, J. Vuopio, K. Raisanen, D.A. Caugant, M. Steinbakk, D.E. Low, A..., Proc Natl Acad Sci USA, 1/1/2014
• A genomic day in the life of a clinical microbiology laboratory  
  Long, S.W., D. Williams, C. Valson, C.C. Cantu, P. Cernoch, J.M. Musser, R.J. Olsen., J Clin Microbiol, 1/1/2013
• Bacterial genomics in infectious disease and the clinical pathology laboratory  
  Olsen, R.J., S.W. Long, J.M. Musser., Arch Pathol Lab Med, 1/1/2012
• A strategy for rapid identification and antibiotic susceptibility testing of Gram-negative bacteria directly recovered from positive blood cultures using the Bruker MA...  
  Wimmer, J.L., S.W. Long, P. Cernoch, G.A. Land, J.R. Davis, J.M. Musser, R.J. Olsen., J Clin Microbiol., 1/1/2012
• Rapidly progressive, fatal, inhalation anthrax-like infection in a human  
  Wright, A.M., S.B. Beres, E.N. Consamus, S.W. Long, A.R. Flores, R. Barrios, G.S. Richter, S-Y Oh, G. Garufi, H. Maier, A.L. Drews, K.E. Stockbauer, P. Cernoch, O. Sch..., Arch Pathol Lab Med, 1/1/2011
• A preliminary investigation of Ehrlichia species in ticks, humans, dogs, and capybaras from Brazil  
  Labruna, M.B., J.W. McBride, L.M. Camargo, D.M. Aguiar, M.J. Yabsley, W.R. Davidson, E.Y. Stromdahl, P.C. Williamson, R.W. Stich, S.W. Long, E.P. Camargo, and D.H. Wal..., Vet Parasitol, 1/1/2007
• Overcoming barriers to the transformation of the genus  
  Long, S.W., T.J. Whitworth, X.J. Yu, and D.H. Walker., Ehrlichia. Ann. N.Y. Acad. Sci., 1/1/2005
• The prevalence of Ehrlichia species in Amblyomma americanum in central Texas  
  Long, S.W., J.M. Pound, and X.J. Yu., Emerg. Infect. Dis., 1/1/2004
• Evaluation of transovarial transmission and transmissibility of Ehrlichia chaffeensis (Rickettsiales: Anaplasmataceae) in Amblyomma americanum (Acari: Ixodidae)  
  Long, S.W., X. Zhang, J. Zhang, R.P. Ruble, P. Teel, and X.J. Yu., J. Med. Entomol., 1/1/2003
• Experimental Ehrlichia chaffeensis infection in beagles  
  Zhang, X.F., S.W. Long, J. Zhang, R.P. Ruble, and X.J. Yu., J. Med. Microbiol., 1/1/2003
• Antigenic variation of Ehrlichia chaffeensis resulting from differential expression of the 28-kDa protein gene family  
  Long, S.W., X. Zhang, H. Qi, S. Standaert, D.H. Walker, and X.J. Yu., Infect. Immun., 1/1/2002
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Books/Book Chapters

• Training Students for Changing Demands in Research: Student Perspectives on Meeting this Challenge at the University of Texas Medical Branch 
  Chapter: Essay 
  Long, S.W.Editors: J. Papaconstantinou.UTMB, Galveston, TX2005

Abstracts/Posters

• Functional analyses of PPP2R1B mutations in small-cell lung carcinoma
  Esplin ED, Li JL, Long SW, Ramos PM, Stickens D, Thomas SD, Wang SS, Evans GA., Am. J. Hum. Genet., 1/1/1999

Lectures

• Basic Molecular Microbiology: A Practical Case-Based Approach 
  Houston, TX - 1/4/2014
• Overcoming barriers to the transformation of the genus Ehrlichia 
  Logrono, Spain - 1/1/2005
• The transformation of Ehrlichia: methods and applications 
  Houston, TX - 1/5/2004
• The prevalence of Ehrlichia species in Amblyomma americanum in central Texas 
  Rocky Gap Resort, MD - 1/30/2003
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