ThomasFuchsMD

PubMed

• 7 citations
  A deep learning algorithm with high sensitivity for the detection of basal cell carcinoma in Mohs micrographic surgery frozen sections.
  Gabriele Campanella, Kishwer S. Nehal, Erica H. Lee, Anthony M. Rossi, Brandon Possum, Genna Manuel, Thomas J. Fuchs, Klaus J. Busam> ;Journal of the American Academy of Dermatology. 2021 Nov 1
• 27 citations
  Integrated digital pathology at scale: A solution for clinical diagnostics and cancer research at a large academic medical center.
  Peter J. Schüffler, Luke Geneslaw, D Vijay K Yarlagadda, Matthew G. Hanna, Jennifer Samboy, Evangelos Stamelos, Chad M. Vanderbilt, John Philip, Marc-Henri Jean, Lorra...> ;Journal of the American Medical Informatics Association. 2021 Aug 13
• 21 citations
  Deep Learning for Basal Cell Carcinoma Detection for Reflectance Confocal Microscopy
  Gabriele Campanella, Cristian Navarrete-Dechent, Konstantinos Liopyris, Jilliana Monnier, Saud Aleissa, Brahmteg Minhas, Alon Scope, Caterina Longo, Pascale Guitera, G...> ;The Journal of Investigative Dermatology. 2021 Jul 12
• 44 citations
  Independent real-world application of a clinical-grade automated prostate cancer detection system.
  Leonard Da Silva, Emílio M. Pereira, Paulo G O Salles, Ran Godrich, Rodrigo Ceballos, Jeremy D. Kunz, Adam Casson, Julian Viret, Sarat Chandarlapaty, Carlos Gil Ferrei...> ;The Journal of Pathology. 2021 Apr 27
• 9 citations
  Multi-magnification-based machine learning as an ancillary tool for the pathologic assessment of shaved margins for breast carcinoma lumpectomy specimens.
  Timothy M. D'Alfonso, David Joon Ho, Matthew G. Hanna, Anne Grabenstetter, Dig Vijay Kumar Yarlagadda, Luke Geneslaw, Peter Ntiamoah, Thomas J. Fuchs, Lee K. Tan> ;Modern Pathology. 2021 Apr 26
• 1 citations
  FlexTileSource: An OpenSeadragon Extension for Efficient Whole-Slide Image Visualization.
  Peter J. Schüffler, Gamze Gokturk Ozcan, Hikmat Al-Ahmadie, Thomas J. Fuchs> ;Journal of Pathology Informatics. 2021 Jan 1
• 2 citations
  Overcoming an Annotation Hurdle: Digitizing Pen Annotations from Whole Slide Images.
  Peter J. Schüffler, Dig Vijay Kumar Yarlagadda, Chad M. Vanderbilt, Thomas J. Fuchs> ;Journal of Pathology Informatics. 2021 Jan 1
• 24 citations
  Interpretable multimodal deep learning for real-time pan-tissue pan-disease pathology search on social media.
  Andrew J. Schaumberg, Wendy C. Juarez-Nicanor, Sarah J. Choudhury, Laura G. Pastrián, Bobbi S. Pritt, Mario Prieto Pozuelo, Ricardo Sotillo Sánchez, Khanh Ho, Nusrat Z...> ;Modern Pathology. 2020 May 28
• 83 citations
  Novel artificial intelligence system increases the detection of prostate cancer in whole slide images of core needle biopsies.
  Patricia Raciti, Jillian Sue, Rodrigo Ceballos, Ran Godrich, Jeremy D. Kunz, Supriya Kapur, Victor E. Reuter, Leo Grady, Christopher Kanan, David S. Klimstra, Thomas J...> ;Modern Pathology. 2020 May 11
• 867 citations
  Clinical-grade computational pathology using weakly supervised deep learning on whole slide images.
  Gabriele Campanella, Matthew G. Hanna, Luke Geneslaw, Allen P. Miraflor, Vitor Werneck Krauss Silva, Klaus J. Busam, Edi Brogi, Victor E. Reuter, David S. Klimstra, Th...> ;Nature Medicine. 2019 Jul 15
• 113 citations
  DeepPET: A deep encoder–decoder network for directly solving the PET image reconstruction inverse problem
  Ida Häggström, C. Ross Schmidtlein, Gabriele Campanella, Thomas J. Fuchs> ;Medical Image Analysis. 2019 May 1
• 95 citations
  Whole slide imaging equivalency and efficiency study: experience at a large academic center.
  Matthew G. Hanna, Victor E. Reuter, Meera Hameed, Lee K. Tan, Sarah Chiang, Carlie S. Sigel, Travis J. Hollmann, Dilip Giri, Jennifer Samboy, Carlos Moradel, Andrea Ro...> ;Modern Pathology. 2019 Feb 18
• 13 citations
  Semiautomatic Assessment of the Terminal Ileum and Colon in Patients with Crohn Disease Using MRI (the VIGOR++ Project)
  Carl A. J. Puylaert, Peter J. Schüffler, Robiel E. Naziroglu, Jeroen A. W. Tielbeek, Zhang Li, Jesica Makanyanga, Charlotte J. Tutein Nolthenius, C. Yung Nio, Douglas ...> ;Academic Radiology. 2018 Feb 7
• 117 citations
  Hybrid Deep Learning on Single Wide-field Optical Coherence tomography Scans Accurately Classifies Glaucoma Suspects.
  Hassan Muhammad, Thomas J. Fuchs, Nicole De Cuir, Carlos Gustavo De Moraes, Dana M. Blumberg, Jeffrey M. Liebmann, Robert Ritch, Donald C. Hood> ;Journal of Glaucoma. 2017 Dec 1
• 21 citations
  Towards machine learned quality control: A benchmark for sharpness quantification in digital pathology.
  Gabriele Campanella, Arjun Rajanna, Lorraine Corsale, Peter J. Schüffler, Yukako Yagi, Thomas J. Fuchs> ;Computerized Medical Imaging and Graphics. 2017 Sep 1
• 5 citations
  DeepScope: Nonintrusive Whole Slide Saliency Annotation and Prediction from Pathologists at the Microscope
  Andrew J. Schaumberg, S. Joseph Sirintrapun, Hikmat Al-Ahmadie, Peter J. Schüffler, Thomas J. Fuchs> ;Computational Intelligence Methods for Bioinformatics and Biostatistics. 2016 Sep 1
• 15 citations
  Cancer-secreted AGR2 induces programmed cell death in normal cells
  Elizabeth A. Vitello, Sue Ing Quek, Heather Kincaid, Thomas J. Fuchs, Daniel J. Crichton, Pamela Troisch, Alvin Y. Liu> ;Oncotarget. 2016 Jun 8
• 21 citations
  Image-based computational quantification and visualization of genetic alterations and tumour heterogeneity.
  Qing Zhong, Jan H. Rüschoff, Tiannan Guo, Maria Gabrani, Peter J. Schüffler, Markus Rechsteiner, Yansheng Liu, Thomas J. Fuchs, Niels J. Rupp, Christian D. Fankhauser,...> ;Scientific Reports. 2016 Apr 7
• Correction: Aerosols transmit prions to immunocompetent and immunodeficient mice
  Johannes Haybaeck, Mathias Heikenwalder, Britta Klevenz, Petra Schwarz, Ilan Margalith, Claire Bridel, Kirsten D. Mertz, Elizabeta Zirdum, Benjamin Petsch, Thomas J. F...> ;Plos Pathogens. 2016 Feb 12
• 51 citations
  Machine learning approaches to analyze histological images of tissues from radical prostatectomies
  Arkadiusz Gertych, Nathan Ing, Zhaoxuan Ma, Thomas J. Fuchs, Sadri Salman, Sambit K. Mohanty, Sanica Bhele, Adriana Velásquez-Vacca, Mahul B. Amin, Beatrice S. Knudsen> ;Computerized Medical Imaging and Graphics. 2015 Dec 1
• 44 citations
  TMARKER: A free software toolkit for histopathological cell counting and staining estimation
  Peter J. Schüffler, Thomas J. Fuchs, Cheng Soon Ong, Peter J. Wild, Niels J. Rupp, Joachim M. Buhmann> ;Journal of Pathology Informatics. 2013 Jan 1
• 48 citations
  p53 suppresses type II endometrial carcinomas in mice and governs endometrial tumour aggressiveness in humans
  Peter J. Wild, Kristian Ikenberg, Thomas J. Fuchs, Markus Rechsteiner, Strahil Georgiev, Niklaus Fankhauser, Aurelia Noske, Matthias Roessle, Rosmarie Caduff, Athanass...> ;EMBO Molecular Medicine. 2012 Aug 1
• 59 citations
  A seven-marker signature and clinical outcome in malignant melanoma: a large-scale tissue-microarray study with two independent patient cohorts
  Stefanie Meyer, Thomas J. Fuchs, Anja K. Bosserhoff, Ferdinand Hofstädter, Armin Pauer, Volker Roth, Joachim M. Buhmann, Ingrid Moll, Nikos Anagnostou, Johanna M. Bran...> ;Plos One. 2012 Jun 7
• 142 citations
  Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer
  Igor Cima, Ralph Schiess, Peter J. Wild, Martin Kaelin, Peter J. Schüffler, Vinzenz Lange, Paola Picotti, Reto Ossola, Arnoud J. Templeton, Olga T. Schubert, Thomas J....> ;Proceedings of the National Academy of Sciences of the United States of America. 2011 Feb 22
• 46 citations
  Aerosols transmit prions to immunocompetent and immunodeficient mice
  Johannes Haybaeck, Mathias Heikenwalder, Britta Klevenz, Petra Schwarz, Ilan Margalith, Claire Bridel, Kirsten D. Mertz, Elizabeta Zirdum, Benjamin Petsch, Thomas J. F...> ;Plos Pathogens. 2011 Jan 13
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