Wei WeiNiuMD

PubMed

• 21 citations
  Modeling genetic epilepsies in a dish
  Wei Niu, Jack M. Parent> ;Developmental Dynamics. 2020 Jan 1
• 1 citations
  Corrigendum: Regulatory analysis of the C. elegans genome with spatiotemporal resolution.
  Carlos L. Araya, Trupti Kawli, Anshul Kundaje, Lixia Jiang, Beijing Wu, D. Vafeados, Robert Terrell, Peter Weissdepp, Louis Gevirtzman, Daniel L. Mace, Wei Niu, Alan P...> ;Nature. 2015 Dec 3
• 225 citations
  The autism-associated chromatin modifier CHD8 regulates other autism risk genes during human neurodevelopment
  Justin Cotney, Rebecca A. Muhle, Stephen Sanders, Li Liu, A. Jeremy Willsey, Wei Niu, Wenzhong Liu, Lambertus Klei, Jing Lei, Jun Yin, Steven K. Reilly, Andrew T.N. Te...> ;Nature Communications. 2015 Mar 10
• 81 citations
  Regulatory analysis of the C. elegans genome with spatiotemporal resolution
  Carlos L. Araya, Trupti Kawli, Anshul Kundaje, Lixia Jiang, Beijing Wu, D. Vafeados, Robert Terrell, Peter Weissdepp, Louis Gevirtzman, Daniel L. Mace, Wei Niu, Alan P...> ;Nature. 2014 Aug 28
• 130 citations
  Comparative analysis of regulatory information and circuits across distant species
  Alan P. Boyle, Carlos L. Araya, Cathleen M. Brdlik, Philip Cayting, Chao Cheng, Yong Cheng, Kathryn E. Gardner, LaDeana W. Hillier, J. Janette, Lixia Jiang, Dionna M. ...> ;Nature. 2014 Aug 28
• 6 citations
  Chromatin Immunoprecipitation and Multiplex Sequencing (ChIP-Seq) to Identify Global Transcription Factor Binding Sites in the Nematode Caenorhabditis Elegans
  Cathleen M. Brdlik, Wei Niu, Michael Snyder> ;Methods in Enzymology. 2014 Jan 1
• 624 citations
  Coexpression Networks Implicate Human Midfetal Deep Cortical Projection Neurons in the Pathogenesis of Autism
  A. Jeremy Willsey, Stephen Sanders, Mingfeng Li, Shan Dong, Andrew T.N. Tebbenkamp, Rebecca A. Muhle, Steven K. Reilly, Leon Lin, Sofia Fertuzinhos, Jeremy A. Miller, ...> ;Cell. 2013 Nov 21
• 11 citations
  RSR-2, the Caenorhabditis elegans ortholog of human spliceosomal component SRm300/SRRM2, regulates development by influencing the transcriptional machinery.
  Laura Fontrodona, Montserrat Porta-de-la-Riva, Tomás Morán, Wei Niu, Mónica Díaz, David Aristizábal-Corrales, Alberto Villanueva, Simó Schwartz, Valerie Reinke, Julián...> ;Plos Genetics. 2013 Jun 6
• 38 citations
  Tissue-specific direct targets of Caenorhabditis elegans Rb/E2F dictate distinct somatic and germline programs.
  Michelle M. Kudron, Wei Niu, Zhi Lu, Guilin Wang, Mark Gerstein, Michael Snyder, Valerie Reinke> ;Genome Biology. 2013 Jan 23
• 190 citations
  A Genome-Scale Resource for In Vivo Tag-Based Protein Function Exploration in C. elegans
  Mihail Sarov, John I. Murray, Kristin Schanze, Andrei Pozniakovski, Wei Niu, Karolin Angermann, Susanne Hasse, Michaela Rupprecht, Elisabeth Vinis, Matthew Tinney, Eli...> ;Cell. 2012 Aug 17
• 67 citations
  Construction and Analysis of an Integrated Regulatory Network Derived from High-Throughput Sequencing Data
  Chao Cheng, Koon-Kiu Yan, Woochang Hwang, Jiang Qian, Nitin Bhardwaj, Joel Rozowsky, Zhi John Lu, Wei Niu, P. Alves, Masaomi Kato, Michael Snyder, Mark Gerstein> ;Plos Computational Biology. 2011 Nov 17
• 177 citations
  Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans
  Wei Niu, Zhi John Lu, Mei Zhong, Mihail Sarov, John I. Murray, Cathleen M. Brdlik, J. Janette, Chao Chen, P. Alves, Elicia Preston, Cindie Slightham, Lixia Jiang, Anth...> ;Genome Research. 2011 Feb 1
• 5 citations
  High-Throughput Immunofluorescence Microscopy Using Yeast Spheroplast Cell-Based Microarrays
  Wei Niu, G. Traver Hart, Edward M. Marcotte> ;Methods in Molecular Biology. 2011 Jan 1
• 20 citations
  A widespread distribution of genomic CeMyoD binding sites revealed and cross validated by ChIP-Chip and ChIP-Seq techniques.
  Haiyan Lei, Tetsunari Fukushige, Wei Niu, Mihail Sarov, Valerie Reinke, Michael Krause> ;Plos One. 2010 Dec 29
• 734 citations
  Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project
  Mark Gerstein, Zhi John Lu, Eric L. Van Nostrand, Chao Cheng, Bradley I. Arshinoff, Tao Liu, Kevin Y. Yip, R. Robilotto, Andreas Rechtsteiner, Kohta Ikegami, P. Alves,...> ;Science. 2010 Dec 24
• 139 citations
  Genome-Wide Identification of Binding Sites Defines Distinct Functions for Caenorhabditis elegans PHA-4/FOXA in Development and Environmental Response
  Mei-fang Zhong, Wei Niu, Zhi John Lu, Mihail Sarov, John I. Murray, J. Janette, Debasish Raha, Karyn L. Sheaffer, Hugo Y. K. Lam, Elicia Preston, Cindie Slightham, LaD...> ;Plos Genetics. 2010 Feb 19
• 22 citations
  Systematic definition of protein constituents along the major polarization axis reveals an adaptive reuse of the polarization machinery in pheromone-treated budding ye...
  Rammohan Narayanaswamy, Emily K. Moradl, Wei Niu, G. Traver Hart, Matthew Davis, Kriston L. McGary, Andrew D. Ellington, Edward M. Marcotte> ;Journal of Proteome Research. 2009 Jan 1
• 54 citations
  Mechanisms of cell cycle control revealed by a systematic and quantitative overexpression screen in S. cerevisiae.
  Wei Niu, Zhihua Li, Wenjing Zhan, Vishwanath R. Iyer, Edward M. Marcotte> ;Plos Genetics. 2008 Jul 11
• 22 citations
  Group II Intron Protein Localization and Insertion Sites Are Affected by Polyphosphate
  Junhua Zhao, Wei Niu, Jun Yao, Sabine Mohr, Edward M. Marcotte, Alan M. Lambowitz> ;Plos Biology. 2008 Jun 24
• 35 citations
  Systematic profiling of cellular phenotypes with spotted cell microarrays reveals mating-pheromone response genes
  Rammohan Narayanaswamy, Wei Niu, Alexander D. Scouras, G. Traver Hart, Jonathan Davies, Andrew D. Ellington, Vishwanath R. Iyer, Edward M. Marcotte> ;Genome Biology. 2006 Jan 31
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